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Information for unigene UN20042

FASTA Sequence
Unigene ID: UN20042Length: 1470 SSR 
GGACACACATGTGGATCTCACCATCTCTTCTTATCGATACAAAAGTCATTCGAAATCGCTGCTTTTATCAGAAAAGAATCTATCCC
GTGATCCTGCTCGTCGTATCAATAATATTCGATCACTGATTTGGAGATGGACAAGTACGAGGTCGTGAAGGATCTGGGGACTGGAA
ACTTCGGTGTGGCTCGCCTTCTTAGGCACAAGGAAACCAATGAGCTCGTCGCCATGAAATACATCGAGAGAGGCCGAAAGATAGAT
GAGAACGTGGCTAGAGAGATTATCAATCACAGATCACTTAAGCATCCTAATATCATTCGCTTCAAGGAGGTGATTCTGACCCCTAC
TCATCTTGCCATTGTGATGGAGTATGCTTCTGGAGGAGAGCTCTTTGAGAGGATCTGCACTGCCGGTAGATTCAGTGAAGCTGAGG
CTAAGTACTTCTTTCAACAGCTGATTTGTGGCGTCGACTACTGCCACTCCTTGCAAATATGCCACAGAGATCTGAAGCTTGAGAAC
ACACTGCTTGATGGTAGCCCTGCTCCGCTTTTGAAAATCTGTGATTTTGGTTACTCCAAGTCATCTATACTACATTCCATTCCTAA
ATCGACTGTTGGAACTCCAGCATACATAGCACCTGAAGTTCTTTCCCGTAAAGAATATGATGGCAAGCACGCGGATGTGTGGTCAT
GTGGTGTAACCCTATATGTGATGCTGGTTGGAGCTTACCCATTTGAGGACCCTAATGATCCAAAGAACTTCAGGAAAACTATCCAA
CGTATAATGGCTATACAATACAAGATTCCGGACTACGTTCACATATCTCAGGAATGCAAACACCTTCTCTCTCGCATTTTCGTCAC
TAACCCCGCTAAGAGAATCACGCTTAAGGAGATCAAGAATCATCCGTGGTACACAAAGAATCTGCCAAAGGAGCTTCTGGAGTCTG
CTCAAGCAGTGTATTACAAGAGAGACAACACGAGCTATTCTCTTCAAAGCGTAGAGGACATAATGAAGATAGTTGGAGAAGCTAGG
AATCCAGCTTCTTCTTCAAGTGTCATCAAAAGCTTAGGATCAGGTGCTGAGGAAGAAGAGGAAGAGGACGTTGAAGCTGAAGTGGG
AGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAAGAAGATGAATACGAGAAGCATGTCAAAGAGGCACATTCTT
CTATTCAAGAGCCTCTCGGAGCGTTAGAAATAAAATGATCACCTCATCACCGTTGATCCTACAAAAGCCAAAGGGTGTAAACTACT
TGGTACATGCTATTTCACTTTTTAGATTTGATGTCTGAAAACATTCTCGTTTCAGTCAACTGTCACTAGGTGGTTCCTCAATAAAT
GAACATTGATACTCAAGAGCGATGCTGTCAGATCTGAATTATCAACATAAGGGTCAGTATTATAAATGATAATAAAAACGATGTCT
TTGTTTGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAE99712 serine/threonine-protein kinase [Arabidopsis thaliana]16564e-182
AAM65503 serine/threonine-protein kinase [Arabidopsis thaliana]16555e-182
NP_201170 serine/threonine-protein kinase SRK2H [Arabidopsis thaliana]16539e-182
NP_196476 serine/threonine-protein kinase SRK2G [Arabidopsis thaliana]16441e-180
XP_002871349 hypothetical protein ARALYDRAFT_908839 [Arabidopsis lyrata subsp. lyrata]16431e-180

Swiss-Prot top hits (Blast detail)Scoree value
Q9FFP9 Serine/threonine-protein kinase SRK2H16534e-183
P43292 Serine/threonine-protein kinase SRK2G16444e-182
Q7XQP4 Serine/threonine-protein kinase SAPK714625e-161
Q9C958 Serine/threonine-protein kinase SRK2B14536e-160
Q6ZI44 Serine/threonine-protein kinase SAPK614421e-158

TrEMBL top hits (Blast detail)Scoree value
Q70CF4 Serine/threonine-protein kinase15532e-170
C0Z2L2 AT5G63650 protein15443e-169
A5B9S1 Putative uncharacterized protein15067e-165
Q8RXH5 Osmotic stress-activated protein kinase14861e-162
B9SXF7 Serine/threonine-protein kinase ASK1, putative14629e-160

Arabidopsis top hits (Blast detail)Scoree value
AT5G63650.1 SNRK2.5 (SNF1-RELATED PROTEIN KINASE 2.5); kinase16533e-184
AT5G08590.1 SNRK2.1 (SNF1-RELATED PROTEIN KINASE 2.1); kinase/ protein kinase16444e-183
AT1G60940.1 SNRK2.10 (SNF1-RELATED PROTEIN KINASE 2.10); kinase14535e-161
AT1G60940.2 SNRK2.10 (SNF1-RELATED PROTEIN KINASE 2.10); kinase14535e-161
AT1G10940.1 SNRK2.4 (SNF1-RELATED PROTEIN KINASE 2.4); kinase14356e-159

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  20%
 
111  10%
 
103  30%
 
83  30%
 
61  10%

Unigene MembersMember information