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Information for unigene UN20046
| FASTA Sequence |
| Unigene ID: UN20046 | Length: 1507 |
SSR | SNP | GGATAACAGTTACTACACGTACCCTTCTCTCTCTCTCTCTCTGTAACGTACGTGTCCTCTCAAATCGGGTCGGGTCCTATCTTCAA
TGCGAATACGTTCCTCATTCTTCTCTATCTTCCTCCGTTCCTCTTCTCCTTCCTCTCGTTTCTCCTCCTCTCTCTCCTCCGCTATG
TCTCCAGGCGCTAATGGTGATTTGATGAAATCTAGGGTTACGGTCGTGGGCAGTGGCAATTGGGGAAGCGTTGCTGCTAAGCTCAT
CGCTTCTAATGCCCTCAAGCTTCCTTCTTTCCATGATGAAGTTAGGATGTGGGTGTTTGAGGAAGTTCTCCCAAATGGTGAGAAGC
TCACTGATGTAATCAACAAAACCAATGAAAATGTCAAGTATCTCCCTGGAATCAAGTTAGGAAGAAATGTTGTTGCAGATCCTGAC
CTTGAAAACGCAGTGAAGGAAGCAAACATGTTGGTTTTTGTTACACCGCATCAATTCATGGGTGGTATATGCAAGAAGCTTAAGGG
AAAGGTAACAGGAGAGGTTGAGGCTATATCTCTTGTTAAAGGGATGGAAGTCAAGAAGGAAGGTCCCTGCATGATCTCTACTCTCA
TCTCCAAGGAACTTGGTATCAACTGTTGTGTTCTTATGGGCGCTAACATCGCCAACGAGATTGCTGTGGAGAAGTTTAGCGAAGCA
ACGGTTGGATACAGAGAGAGTAAAGAAATAGCTGACACTTGGGTTCAGTTGTTTAGTACTCCCTATTTTATGGTCACACCGGTTCA
TGATGTTGAAGGAGTAGAGTTGTGTGGGACCTTGAAGAATGTTGTGGCTATTGCAGCGGGTTTCGTTGATGGTTTGGATATGGGTA
ATAACACAAAGGCTGCAATCATGAGGATTGGTTTGAGAGAGATGAGAGCACTCTCGAAGCTTCTGTTTCCATCTGTTAAAGACAGT
ACTTTCTTCGAGAGCTGTGGTGTAGCAGATGTCATAACAACTTGCTTAGGAGGAAGAAACAGAAGAGTAGCAGAAGCATTTGCCCA
AAGTGGAGGAAAAAGGTCTTTTGATGAGCTTGAAGCAGAGATGCTACAAGGGCAAAAGCTACAGGGTGTTTCCACGGCAAGAGAGG
TCTACGAGGTCTTGAACCACTGTGGATGGATGGAGATGTTTCCGCTGTTTTCAACGGTTCACCAAATCTGCACAGGTCGTCTTAAA
CCTGAAGCCATTGTTCATTACCGTGACCACAAAGCCTGATGATCACTCTTGATGGTCCCATTCATCTGCAATGAATATTTCTGTGT
TGATGTAGAAGTTTAACGTTTTTGTTTCTTTGAGAATGTTTTCTGGTGAGTTGGACCTTCTAGCTGGTTTAGAGGATCCTGTTCAT
TCAAAGTTTTTGGTCCAATTGAAATTTAATTTGCTTGGATCGAACACGAGTACAATCATGTGCTCAATGTTGTAATCACTGAGTAC
TGAATTCGTTTATTCAATTTGAAAGATTCACGAACAATCGTTTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002868644 hypothetical protein ARALYDRAFT_493921 [Arabidopsis lyrata subsp. lyrata] | 1713 | 1e-188 |
| NP_198877 glycerol-3-phosphate dehydrogenase [NAD+] [Arabidopsis thaliana] | 1709 | 3e-188 |
| AAL87336 putative dihydroxyacetone 3-phosphate reductase dhaprd [Arabidopsis thaliana] | 1709 | 3e-188 |
| P52425 RecName: Full=Glycerol-3-phosphate dehydrogenase [NAD+] | 1536 | 3e-168 |
| XP_002526956 glycerol-3-phosphate dehydrogenase, putative [Ricinus communis] | 1533 | 8e-168 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SCX9 Glycerol-3-phosphate dehydrogenase [NAD+], chloroplastic | 1709 | 1e-189 |
| P52425 Glycerol-3-phosphate dehydrogenase [NAD+] | 1536 | 1e-169 |
| Q27556 Glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic | 883 | 8e-094 |
| Q27567 Glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic | 882 | 1e-093 |
| P13706 Glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic | 880 | 2e-093 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SLT7 Glycerol-3-phosphate dehydrogenase, putative | 1533 | 5e-168 |
| B9IJL4 Predicted protein | 1527 | 3e-167 |
| A5B7F6 Putative uncharacterized protein | 1510 | 2e-165 |
| B4FZV9 Glycerol-3-phosphate dehydrogenase | 1445 | 8e-158 |
| C5XJD7 Putative uncharacterized protein Sb03g047310 | 1443 | 1e-157 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G40610.1 glycerol-3-phosphate dehydrogenase (NAD+) / GPDH | 1709 | 1e-190 |
| AT2G40690.1 GLY1; glycerol-3-phosphate dehydrogenase (NAD+) | 295 | 1e-026 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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