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Information for unigene UN20046

FASTA Sequence
Unigene ID: UN20046Length: 1507 SSRSNP
GGATAACAGTTACTACACGTACCCTTCTCTCTCTCTCTCTCTGTAACGTACGTGTCCTCTCAAATCGGGTCGGGTCCTATCTTCAA
TGCGAATACGTTCCTCATTCTTCTCTATCTTCCTCCGTTCCTCTTCTCCTTCCTCTCGTTTCTCCTCCTCTCTCTCCTCCGCTATG
TCTCCAGGCGCTAATGGTGATTTGATGAAATCTAGGGTTACGGTCGTGGGCAGTGGCAATTGGGGAAGCGTTGCTGCTAAGCTCAT
CGCTTCTAATGCCCTCAAGCTTCCTTCTTTCCATGATGAAGTTAGGATGTGGGTGTTTGAGGAAGTTCTCCCAAATGGTGAGAAGC
TCACTGATGTAATCAACAAAACCAATGAAAATGTCAAGTATCTCCCTGGAATCAAGTTAGGAAGAAATGTTGTTGCAGATCCTGAC
CTTGAAAACGCAGTGAAGGAAGCAAACATGTTGGTTTTTGTTACACCGCATCAATTCATGGGTGGTATATGCAAGAAGCTTAAGGG
AAAGGTAACAGGAGAGGTTGAGGCTATATCTCTTGTTAAAGGGATGGAAGTCAAGAAGGAAGGTCCCTGCATGATCTCTACTCTCA
TCTCCAAGGAACTTGGTATCAACTGTTGTGTTCTTATGGGCGCTAACATCGCCAACGAGATTGCTGTGGAGAAGTTTAGCGAAGCA
ACGGTTGGATACAGAGAGAGTAAAGAAATAGCTGACACTTGGGTTCAGTTGTTTAGTACTCCCTATTTTATGGTCACACCGGTTCA
TGATGTTGAAGGAGTAGAGTTGTGTGGGACCTTGAAGAATGTTGTGGCTATTGCAGCGGGTTTCGTTGATGGTTTGGATATGGGTA
ATAACACAAAGGCTGCAATCATGAGGATTGGTTTGAGAGAGATGAGAGCACTCTCGAAGCTTCTGTTTCCATCTGTTAAAGACAGT
ACTTTCTTCGAGAGCTGTGGTGTAGCAGATGTCATAACAACTTGCTTAGGAGGAAGAAACAGAAGAGTAGCAGAAGCATTTGCCCA
AAGTGGAGGAAAAAGGTCTTTTGATGAGCTTGAAGCAGAGATGCTACAAGGGCAAAAGCTACAGGGTGTTTCCACGGCAAGAGAGG
TCTACGAGGTCTTGAACCACTGTGGATGGATGGAGATGTTTCCGCTGTTTTCAACGGTTCACCAAATCTGCACAGGTCGTCTTAAA
CCTGAAGCCATTGTTCATTACCGTGACCACAAAGCCTGATGATCACTCTTGATGGTCCCATTCATCTGCAATGAATATTTCTGTGT
TGATGTAGAAGTTTAACGTTTTTGTTTCTTTGAGAATGTTTTCTGGTGAGTTGGACCTTCTAGCTGGTTTAGAGGATCCTGTTCAT
TCAAAGTTTTTGGTCCAATTGAAATTTAATTTGCTTGGATCGAACACGAGTACAATCATGTGCTCAATGTTGTAATCACTGAGTAC
TGAATTCGTTTATTCAATTTGAAAGATTCACGAACAATCGTTTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002868644 hypothetical protein ARALYDRAFT_493921 [Arabidopsis lyrata subsp. lyrata]17131e-188
NP_198877 glycerol-3-phosphate dehydrogenase [NAD+] [Arabidopsis thaliana]17093e-188
AAL87336 putative dihydroxyacetone 3-phosphate reductase dhaprd [Arabidopsis thaliana]17093e-188
P52425 RecName: Full=Glycerol-3-phosphate dehydrogenase [NAD+]15363e-168
XP_002526956 glycerol-3-phosphate dehydrogenase, putative [Ricinus communis]15338e-168

Swiss-Prot top hits (Blast detail)Scoree value
Q9SCX9 Glycerol-3-phosphate dehydrogenase [NAD+], chloroplastic17091e-189
P52425 Glycerol-3-phosphate dehydrogenase [NAD+]15361e-169
Q27556 Glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic8838e-094
Q27567 Glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic8821e-093
P13706 Glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic8802e-093

TrEMBL top hits (Blast detail)Scoree value
B9SLT7 Glycerol-3-phosphate dehydrogenase, putative15335e-168
B9IJL4 Predicted protein15273e-167
A5B7F6 Putative uncharacterized protein15102e-165
B4FZV9 Glycerol-3-phosphate dehydrogenase14458e-158
C5XJD7 Putative uncharacterized protein Sb03g04731014431e-157

Arabidopsis top hits (Blast detail)Scoree value
AT5G40610.1 glycerol-3-phosphate dehydrogenase (NAD+) / GPDH17091e-190
AT2G40690.1 GLY1; glycerol-3-phosphate dehydrogenase (NAD+)2951e-026

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
65  36%
 
123  21%
 
94  29%
 
102  14%

Unigene MembersMember information