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Information for unigene UN20050

FASTA Sequence
Unigene ID: UN20050Length: 2366 SSRSNP
GTAAGGGATGCAATATCAGGACAAATCTTGGTGATAAGGTCAAGTTTAGGTGGGGAAGTAGATGGACTAGGAGGAGGAGGAGGAGT
TGGTATAAGTAGGTTAAGGAACGTTGATCAACAGGTAAGGCAACAGAGAGCGTTGCAGAGGTTAGGCGTGATGCAACCACCTCACG
CTTGGAGGCCTCAACGCGGCCTACCTGATTCCTCTGTTTTGATACTCCGTGCTTGGCTCTTTGAGCATTTCCTCCACCCTTATCCA
AAGGATTCGGACAAGATCATGCTAGCTAGACAAACAGGGTTGAGCAGAGGCCAGGTGTCGAACTGGTTTATAAACGCACGTGTGCG
TCTCTGGAAACCGATGGTGGAGGAGATGTACAAGGAAGAGTTCACAGACGCATTGGAGGAGAATGCTACCACCTTGTCTTCTGGAA
ACAACAGACCTGAAACCACCGAGTCTCAAGAACAGCATCAGCTCGTGTCTAGTTCCAGCAACGGTGGTGGTGACGACCGGTTCATG
ATGGTCACCGAAATGACAAGAAATGGTAGTGGTGGGATGTCTTTAACATTAGGCATTCCGGACACACGCGGCAACGACGTACCTAT
GTCCGGCGACAGCTACGAGAACAGCATCCAGGGAACCAGTTTCCAGTATTTAAACTCAGGCAACGGCCAGCACCGACTTGGCTCGG
CACAATTCTTGCAGGATTTTGTAGCTTGATGAAAAATACAATAGAGAGGGTGTAGTAATAATTATATTCTTTTTGTGAAAGTAAAC
CATCAGATGGAATTAACGAGGACAACTAGCATATCATAAGGCCAAAGGTTTTCACATCAAAAGAACAATAGAAGCTCACTACTTAA
TGAAACAAAACCACAAGCACGTCCAAAAGATTCAACAATCTTTCACAAAAACCAAAAGGACCCTACCCGAAGTTATCTTATTGACA
GGTTTCTAAAACATAAGCATGTCCAAAGCCACAAGAACAAGTTTCCATCAGTAAATTTTCTTCGGTTTACCTTTTGTAGAGAACTC
TTATATCTTCTCGTAAGGCAGGACTTTCAAGGAACAGATCACCAGCATCATCCACATCGATTGTCTCTACCTCAAAGTTACGGTAT
CCACAGTACTCATTCCACTCGAACCACATCTTTGAGATGACTTCCTTTTTGAAGCAAGTGTTGTGATCCTCTTCCTCAGGTGATGA
CCCAGCGATCAATCTGTACGCATGCACTTTCTTCGTCTGTCCTGGTCTAAAAGCTCTCCCTATCGCTTGGCGTGTCACTGAAGGGT
TTAGAGGAACATCCAGAATCAGTATCCGAGATGCTCCAACTAGAGAGATACCTTCTCCACAGGCCCTTATCGAACCGAAGAACACT
TTGGCGTCTGGCGAATTGTTGAACCTTTCCATAGACAACTCACGCTGCTCAGAGCTGGATTCTCCTGTGAGAACAAAGACTTCTTT
CCCTAGCTTCCATCCTTTAGCTAGAGCAGCTAGTCTTTCAAGAAACTTCAGAGGCACGAGATACTGGCTGAAAACCAAGAGCTTCT
CCCCTGCTGAGTCACACAGGTCTATCAAGTTTAGGAAGAACTTTGCTTTCACGCCTTCATCCACATCTAGCTTCTCTAGCATTTCG
TCCATAGTTGAATCAGATACACTATCAGTCTTACTATCAGTCTTTTCAGAGAAAGCGTTCAGCCTCGGATGAAGGTAAATTGCACT
CCCCACAGCCGAAACCTTGAATTTTCTCTTCTCACGCCTCAACTTCTTCACTTCAGTCAACTGCCTTGGAGACAGATTGAGAACCA
CAGTGAAATCATCAAGCCCAGGAAGCTCATCTAAGAAGTCTCCTTTGTAGTAGTGAAGCACCTTCTTTGTCATCTCCCTCAAATCC
TGGATCATGTTAATTTTCATCTTGAAATCCTCGCACTTCTGCAGCGTGTGCTCCACAATTTCGTTGAAAGCCGAAGACACGTCTGA
ATTGCCTCCCAGATGAGACCTGACAGCGGAGATAGGGGTACGACTCAGGATCCTTTTAACAATAGACTTGGAGGTGTCCAACTTGA
GGAACTTTGGTCGAACGAGGTTCAGAATGTTGAAAACCTCCTTCACGTGGTTCTGATAAAGCGTTCCTGAGAGGACAACTTTCCTT
GGTGTTTGGACTTGGGCAAGGGACTGCAATACATTTGTGTCCTCGTTTCTTGGAGTGTGTCCTTCATCCAAAATGAGGATCGAAGG
TACTTTCAGCAATATCTCCTGGCAAGAATGTGAGTAGGTACTTGTATCGTCACAGACAATGGTCGAGAACTGCTTGTAGCCCAGAA
ACAAAATACTCTTCTTCTCCATCCACTGTTTCAAAATGGACAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_179232 SNF2 and helicase domain-containing protein [Arabidopsis thaliana]19901e-220
CAN62867 hypothetical protein VITISV_015925 [Vitis vinifera]16683e-183
XP_002275596 PREDICTED: hypothetical protein [Vitis vinifera]16683e-183
XP_002273814 PREDICTED: hypothetical protein [Vitis vinifera]16674e-183
XP_002305447 chromatin remodeling complex subunit [Populus trichocarpa]16631e-182

Swiss-Prot top hits (Blast detail)Scoree value
Q9SIW1 BEL1-like homeodomain protein 76724e-069
O65685 BEL1-like homeodomain protein 65041e-049
Q9FXG8 BEL1-like homeodomain protein 104672e-045
Q9SJ56 BEL1-like homeodomain protein 14583e-044
Q9FWS9 BEL1-like homeodomain protein 34564e-044

TrEMBL top hits (Blast detail)Scoree value
Q9SIW2 Putative uncharacterized protein At2g1639019909e-221
A5AV95 Putative uncharacterized protein16682e-183
B9H0U7 Chromatin remodeling complex subunit (Fragment)16638e-183
C5YN16 Putative uncharacterized protein Sb07g00294513681e-148
B8B0A7 Putative uncharacterized protein13464e-146

Arabidopsis top hits (Blast detail)Scoree value
AT2G16390.1 DRD1 (DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 1); ATP binding / DNA binding / helicase/ nucleic acid binding19914e-223
AT2G21450.1 CHR34 (chromatin remodeling 34); ATP binding / DNA binding / helicase/ nucleic acid binding13086e-144
AT2G16400.1 BLH7 (bell1-like homeodomain 7); DNA binding / transcription factor6723e-070
AT4G34610.1 BLH6 (BELL1-LIKE HOMEODOMAIN 6); DNA binding / transcription factor5041e-050
AT4G34610.2 BLH6 (BELL1-LIKE HOMEODOMAIN 6); DNA binding / transcription factor5041e-050

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
85  45%
 
121  9%
 
92  18%
 
112  18%
 
71  9%

Unigene MembersMember information