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Information for unigene UN20053
| FASTA Sequence |
| Unigene ID: UN20053 | Length: 1104 |
| SNP | GACATTAAAACCTCGAAACATTTTATATTTTTAAACAACATAAACCGAAATTCATGAGAGAGAAAAAAACGGAAGTAAAGAGGTAC
AAGATGCGTCCAGCTTTAAAAACACTAACTACATTGGCATTGTGTTCAGAATTCAGATCATCACATCTGCAAAACTATAAATTAAA
AAAAAAAAGAGAGAGAAGATCTCGTAGGAAAAGGGCCAAGATTTGCTGAGATGTGTAAGCTTTAATGTTCTGTCATCTTTCTTCAT
CCCATTTGTCTTTAGGGATCTCTCCAGAATCAGCAATCACAACTTTCTTCCTTGGTTTGCCACTGTAAGTACCGGCTCCACCTTCA
ATGGCGAACACATTGTCCATTCCTTGTATCACCTTCCCAAACACAACATGCTCCCCTTCCAACCAGCTAGCCTTGACAGTAGTGAT
AAAGAACTGTGAGCCATTAGAATCAGGTCCTGTATTAGCCATCGCCACAACACCTGCATGTGAATGCTTAATCTTGAAATTTTCGT
CAGGAAAGGTACCACCATAGATTGAGTCACTCCCTTTGCCATCACCATGGATGATGTCTCCTCCTTGGATTACGAATCCAGATATT
ATTCTATGAAAGGGTGTTCCTTTATAGTGTAGAGGCTTCCCGCTTGAAGTTTTCCCCTTCTCTCCTGTGCATAATGCCCTGAAGTT
TTCAACAGTTTTGGGTACAACAGTGCCATATAATCCAATAACGATCCTGCCTAAGCGTTGGCCGTCGATATCAACATCGAGAAACA
CTCTGTGTGTGATTTCATAATCCTGGATCACTTGCTTCTCCTCCTCCTTGCCGGTGTTGAAGAGCGCGAAGATGAGAAAGATGGTT
AGGGCTACGAGGAGAAGAAGGCACCTGGGCTGTAACAAAAACGACATCTCTCTACCCATCTTTCCTTCTTAAGATTTCATCTCACC
CTCCAGAGCTCGATCTCACCCTCCAAATCTCACTCCAAAGAGAGAAACTTTCGCTCTTTTTAAGATTCGATGCTATGGAAATTGTG
TAAATCTTCGCGGCAATCAAGTTTACAGACAGAGTCTGAACCCAAAAACGATCTCCAACAAGTGTGTTCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_195222 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana] | 1125 | 1e-120 |
| XP_002869115 hypothetical protein ARALYDRAFT_491161 [Arabidopsis lyrata subsp. lyrata] | 1125 | 1e-120 |
| BAF81521 putative peptidyl-prolyl cis-trans isomerase [Brassica rapa] | 1054 | 2e-112 |
| XP_002313720 predicted protein [Populus trichocarpa] | 947 | 4e-100 |
| XP_002533862 peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis] | 911 | 7e-096 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LDP4 Peptidyl-prolyl cis-trans isomerase CYP19-4 | 640 | 8e-066 |
| Q9SP02 Peptidyl-prolyl cis-trans isomerase CYP20-1 | 607 | 5e-062 |
| Q9TW32 Peptidyl-prolyl cis-trans isomerase B | 573 | 4e-058 |
| P52015 Peptidyl-prolyl cis-trans isomerase 7 | 548 | 4e-055 |
| P52011 Peptidyl-prolyl cis-trans isomerase 3 | 539 | 4e-054 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O49605 Peptidyl-prolyl cis-trans isomerase | 1125 | 7e-121 |
| A8CF54 Peptidyl-prolyl cis-trans isomerase | 1054 | 1e-112 |
| B9HR79 Predicted protein | 947 | 3e-100 |
| B9T6J3 Peptidyl-prolyl cis-trans isomerase | 911 | 5e-096 |
| C6TGD4 Peptidyl-prolyl cis-trans isomerase | 847 | 1e-088 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G34960.1 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative | 1126 | 3e-123 |
| AT2G29960.1 CYP5 (CYCLOPHILIN 5); peptidyl-prolyl cis-trans isomerase | 640 | 7e-067 |
| AT5G58710.1 ROC7; peptidyl-prolyl cis-trans isomerase | 607 | 5e-063 |
| AT3G55920.1 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative | 576 | 2e-059 |
| AT4G38740.1 ROC1 (ROTAMASE CYP 1); peptidyl-prolyl cis-trans isomerase | 522 | 3e-053 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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