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Information for unigene UN20055

FASTA Sequence
Unigene ID: UN20055Length: 1241  SNP
GGAAGAGTAAAGATGGAATCTTAAATCCAAGGCGAAAAAGGAAGGATGGGCTCCATTGAAGAAGAATCACCTCTCATCGAAGAAGG
TTTAATCTCACAGGAACCAAAACTGTATGCTCAAGATGGTTCAGTGGACCTTCATGGAAACCCACCACTCAAGGAGAAAACAGGCA
ACTGGAAAGCTTGTCCTTTCATCTTAGGTAATGAATGCTGCGAGAGGCTAGCTTACTATGGTATTGCTGGGAATCTAATCACTTAC
CTCACCACTAAACTCCACCAAGGAAACGTTTCCGCTGCTACAAACGTCACCACATGGCAAGGCACTTGTTACCTCACCCCTCTCAT
TGGTGCTGTCTTAGCCGATGCTTACTGGGGCAGATACTGGACCATCGCTTGTTTCTCCGGCATTTACTTCATCGGGATGTCTGCGC
TAACTCTCTCAGCGTCAGTTCCAGCACTGAAGCCAGCGGAATGCATTGGTGATTTCTGTCCATCAGCAACACCAGCTCAGTACGCA
ATGTTCTTTGGAGGGCTTTACCTGATCGCCCTCGGCACTGGAGGCATCAAACCATGCGTCTCATCCTTCGGTGCCGACCAGTTCGA
TGACACGGACTCTCGGGAACGAGTTAAAAAAGCTTCCTTCTTCAACTGGTTCTACTTCTCCATCAACATCGGAGCACTAGTCTCTT
CTAGTCTTCTTGTCTGGATCCAAGAGAACCGCGGCTGGGGTTTAGGGTTTGGTATACCAACAGTGTTCATGGGACTAGCCATTGCG
AGTTTCTTCTTCGGCACACCGCTTTACAGGTTTCAGAAACCTGGAGGCAGCCCTATAACTAGAATCTCCCAAGTCGTGGTCGCCTC
CTTCCGCAAATCCACTCTCAAAGTCCCTGAAGACGCTAAGCTTCTGTATGAAACGCAAGACAAGACCTCTGCTATTGCTGGTAGTC
GAAAAATCGAACATACCAATGATTGCAAGTATCTTGACAAAGCTGCTGTGATCTCAGCAGAAGAATCTAAAGCCGGAGACTTTTCC
AACGCGTGGAGACTATGTACTGTTACTCAAGTCTAAGAACTCAAGATTCTGATACGAATGTTCCCTATATGGGCTTCAGGGATCAT
CTTCTCATCTGTATACGCACAAATGTCCACGATGTTTGTTCAACAAGGCAGAGCAATGGACTGCAAAATCGGATCGTTCCAGCTTC
CTCCAGCAGCGCTTGGGACGTTTGATACAGCTAGCGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ACQ90598 putative nitrate transporter [Eutrema halophilum]20122e-223
NP_178313 peptide transporter PTR2 [Arabidopsis thaliana]19933e-221
XP_002875108 ATPTR2-B [Arabidopsis lyrata subsp. lyrata]19871e-220
CAA54634 oligopeptide transporter 1-1 [Arabidopsis thaliana]19763e-219
XP_002521890 peptide transporter, putative [Ricinus communis]16554e-182

Swiss-Prot top hits (Blast detail)Scoree value
P46032 Peptide transporter PTR219931e-222
Q9M390 Peptide transporter PTR112932e-141
Q9LFB8 Peptide transporter PTR512196e-133
Q9FNL7 Peptide transporter PTR3-A8764e-093
Q9FNL8 Peptide transporter PTR3-B8541e-090

TrEMBL top hits (Blast detail)Scoree value
C7SI16 Putative nitrate transporter20121e-223
B9S7C1 Peptide transporter, putative16553e-182
B9HVP7 Predicted protein16491e-181
Q7XAC3 Peptide transporter 116293e-179
A5AL05 Putative uncharacterized protein16231e-178

Arabidopsis top hits (Blast detail)Scoree value
AT2G02040.1 PTR2 (PEPTIDE TRANSPORTER 2); dipeptide transporter/ high affinity oligopeptide transporter/ nitrate transmembrane transporter/ peptide transporter/ transporter/ tripeptide transporter19931e-223
AT1G62200.1 proton-dependent oligopeptide transport (POT) family protein15199e-169
AT3G54140.1 PTR1 (PEPTIDE TRANSPORTER 1); dipeptide transporter/ transporter/ tripeptide transporter12932e-142
AT5G01180.1 PTR5 (PEPTIDE TRANSPORTER 5); dipeptide transporter/ transporter12196e-134
AT2G02020.1 proton-dependent oligopeptide transport (POT) family protein11901e-130

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
113  33%
 
103  33%
 
62  22%
 
211  11%

Unigene MembersMember information