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Information for unigene UN20058
| FASTA Sequence |
| Unigene ID: UN20058 | Length: 1446 |
| SNP | GGAAAAACTAAAAGTCAGTCTCGGCGACTCTCCATCCTCCATTTGCGGACCTTGAGATAGTTTTGTTCTTAGTTTGTCTCGATGCC
CAGTCGACGGAGGCATAGCTACACAGGCGGATCTTCACCTGCAACATCTTCGTACAGCACAACTAGTACTACTCTTCCTGATCGTT
CTCCAGCTCCTTCCTCCACCACCACCGACAGACAAGCACCTAACTCCCTCGCTCGCTGGATCTCAGGGATCTTCATCAACTGCTTC
ACTCCTCCCGGTTCCGTTTCCTCCAAGAGTTTCAACGACTCCGAACATGATATTCGTAGTAGACGGAGCTCAACAGGAAGTGTGCA
GAAACATTATTATGGAAACGGCAACGGGAACAACGGGAACGAAACAGAGAATCAGAATCAAAGATTCAGCTTCGATGAAATCTACG
CGGCCACCAAGAACTTCTCCCCTTCCTTCAGGATCGGACAAGGAGGTTTCGGCACTGTTTACAAGGTCAAACTTAGAGATGGCTCC
ACCGTTGCTGTCAAACGTGCCAAAAAGAGTTTACACGACGACCGTCAAGGTGCAGAGTTCATGAGCGAGATTAAGACATTGGCTCA
AGTCACACATTTGAGTTTGGTCAAATACTATGGTTATTTGGTGCACAATGACGAGAAGCTTCTCGTTGTGGAGTATGTCCCCAATG
GAAACCTCAGAGATCACTTGGACTGTAAGGATGGAAAGACTCTCGACATGGCAACTCGGCTTGATATCGCTACTGATGTTGCTCAT
GCCATTACCTATCTTCACATGTACACGCAGCCACCTATCATCCACAGAGACATCAAATCTTCAAACATTCTCCTCACTGACAACTT
CAGAGCCAAAGTTGCTGATTTCGGTTTCGCCAGATTAGCTCCAGATTCCGAATCAGGAGCCACTCATGTCTCCACACAAGTCAAAG
GAACCGCTGGTTACTTAGACCCTGAATACTTAACTACTTATCAGCTCACTGAGAAAAGCGACGTCTACTCCTTCGGTGTACTCCTC
GTCGAGCTTCTCACTGGTCGCCGCCCCATTGAGCTTCACAGAGAACAAAAAGAACGCATCACCATTCGATGGGCCATCAAGAAGTT
CACGAGTGGGGATACGATATCGGTTTTGGACCCGAAGCTGGAACGTAATCCATCTAACAACTTAGCACTAGAGAAGGTATTGGAGA
TGGCGTTTCAATGTCTGGCTCCTCATAGAGGTTCGAGACCGAGCATGAAGAAATGCAGTGAGATTCTTTGGGGAATCCGTAAAGAT
TACAGAGAGCTGCTCAACACTAGTCTTTGAGATCTTTCTCTTTGCCCTCTATATATAAAGAAAATGTATTGGTTTCCCCTGTCTCT
AGCAAACTATCTATTTGTCACACACGATGATTCTTGTGCGAGAAATGTTGATTTGTTGTTTGTTTTCTGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_567170 calmodulin-binding receptor-like cytoplasmic kinase 2 [Arabidopsis thaliana] | 1680 | 7e-185 |
| XP_002872958 hypothetical protein ARALYDRAFT_912217 [Arabidopsis lyrata subsp. lyrata] | 1491 | 5e-163 |
| XP_002511888 ATP binding protein, putative [Ricinus communis] | 1260 | 3e-136 |
| XP_002320146 predicted protein [Populus trichocarpa] | 1255 | 1e-135 |
| CAN75716 hypothetical protein VITISV_007757 [Vitis vinifera] | 1220 | 1e-131 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LT96 Probable leucine-rich repeat receptor-like protein kinase At5g49770 | 601 | 4e-061 |
| C0LGD7 Probable LRR receptor-like serine/threonine-protein kinase At1g06840 | 588 | 1e-059 |
| Q8RY67 Wall-associated receptor kinase-like 14 | 551 | 2e-055 |
| Q8GYF5 Wall-associated receptor kinase-like 21 | 550 | 3e-055 |
| Q9FIJ6 Serine/threonine-protein kinase-like protein CCR4 | 540 | 4e-054 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8VZJ9 Putative uncharacterized protein At4g00330 | 1680 | 4e-185 |
| B9RDU9 ATP binding protein, putative | 1260 | 2e-136 |
| B9I8M3 Predicted protein | 1255 | 9e-136 |
| A5AIK5 Putative uncharacterized protein | 1220 | 1e-131 |
| B9GQB4 Predicted protein | 1193 | 1e-128 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G00330.1 CRCK2; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 1681 | 2e-187 |
| AT5G58940.1 CRCK1 (CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 919 | 4e-099 |
| AT2G11520.1 CRCK3; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 789 | 5e-084 |
| AT5G49770.1 leucine-rich repeat transmembrane protein kinase, putative | 601 | 3e-062 |
| AT1G06840.1 leucine-rich repeat transmembrane protein kinase, putative | 588 | 1e-060 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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