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Information for unigene UN20071
| FASTA Sequence |
| Unigene ID: UN20071 | Length: 1039 |
SSR | SNP | GGCCTTAAAAAAAAAGAAAAAGAGAATTATATATAATATGAATTGAGCGCCGCCGCGAGAGAGAGAGAGAGAGAGAGGTGTTCAGG
GGAGCAGATCCGTCCGTGCCTTCCCAGTTCACAGGGAATGATATAGTAGTGGATTGAAACATGTACGGGAGAAAAGGGTATCAGCT
GGTTAAGGATTTTGCGAGTGGGGAGAAGGGTCAGCTCAAACCTTTCAATAGCAAGCTCTTTGATGAGACAATCGAAGAATGCGAGC
AGAATCACCATCTCATCCAGTCTCTCATGAGGAAAATGCAACGAGAAGGGTTGGAGGTTCCGAACAATAGAAACGCTGACCACTAC
GGAGCACTCGTTCATCACCTTTCTTTGATCCGCAACAAGCGCTGCCTCATGGCCTATGTGCACAATAGAGCAGAAATTGTGCGTGA
TCTGGCGTGGAGAGTAGGACTTGAACTTCCCTACCTTCCACCTGAAATCCTTGAGAAGCTCACCACTCTCGAGAAGGAGTATTTCA
AGAACCATTCCGTTGCTATCACTTCCTACATGGGAAAAGCAGGCCTCGAGTTGAATGTCGATATGGTGCCTCCCAAAGATCCGTAC
ATCAAGGTCAGAGTTGTGGGAGATATCGACCGAGGAATTATGATGAATGACAAGGCAACAAATTTCGCACCTCACTCTATGCATTT
CCTCAAACGAACTGATGCAGAACCCTACATTGCTCGGGGGCAAATGGAGGAGCTGACAGGTTGAGGTAGATTGATGCAATAGGAAG
CTTGGGTGATCTCACAGATTAATCAAACGGTATTGGTATGTGTGATCAAAAAGAATGTAAGCTTACATAGTCTTTCTTATTTGTAT
AATTGTAAGACAGGAACAGTGAAACCTCCCTCATACCAGCAAAAAAAAAACTCGATGTACAATTTGTTTTATCTTCCAAAGTTACT
TCAGTAATAACATCACTAGGAACATGGCATTTTTGCTTTGGATAGCAGAAACAAGTTTTTATTCAGTGAGGAATCAAATCCTTGGA
AGCTTCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_178136 GINS complex subunit 1 [Arabidopsis thaliana] | 937 | 6e-099 |
| XP_002889305 hypothetical protein ARALYDRAFT_316941 [Arabidopsis lyrata subsp. lyrata] | 917 | 1e-096 |
| XP_002326120 predicted protein [Populus trichocarpa] | 728 | 1e-074 |
| XP_002517600 partner of sld5, putative [Ricinus communis] | 706 | 4e-072 |
| CBI36282 unnamed protein product [Vitis vinifera] | 643 | 7e-065 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q54HR6 Probable DNA replication complex GINS protein PSF1 | 227 | 5e-018 |
| Q9P7X6 DNA replication complex GINS protein psf1 | 170 | 2e-011 |
| Q626F4 Probable DNA replication complex GINS protein PSF1 | 152 | 3e-009 |
| Q22019 Probable DNA replication complex GINS protein PSF1 | 147 | 1e-008 |
| Q6FVY5 DNA replication complex GINS protein PSF1 | 126 | 3e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SSC0 At1g80190 | 937 | 4e-099 |
| B9MSY7 Predicted protein | 728 | 7e-075 |
| B9RV31 Partner of sld5, putative | 706 | 2e-072 |
| B6THR1 DNA replication complex GINS protein PSF1 | 577 | 2e-057 |
| A2Y5B1 Putative uncharacterized protein | 557 | 5e-055 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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