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Information for unigene UN20078
| FASTA Sequence |
| Unigene ID: UN20078 | Length: 1059 |
| SNP | AGGAGAGCAATATCTTATCCAATTATTATTCTTTTGTTTTATTCTTTAAACATTCTTTAAAAAAGTAGTACTTGATGTTACATAAG
CTTTTGATTGGAAAAAAAACAAACAAAAAGTTAATTATTTATTTAACTTTTTAAATACTCGACCGGCTTGTTAATAAAAGGATAAA
ACTCAAACCTAAAAGTACAGCTCGTACCCACAAATCTCGCTCCTCGTTTATCATTCAAGCAATCTTGAAAATGCAACCTATTGAAA
ACCAAACACTCTTCACAAGCTTGTGGTGATATGTCTTTGGTACACTGCACCATTCCATAAATTGTATCACCCTTGAACCGAGTCTC
CCCCACAGAGTATAATGCTGTTGGCTGACTGTAGTTAACTTGACTGAGGGCTAACGTCGTCAGATTGTCCATGAGAGTATTCCAAA
CACTTGCAAACCCGAGTTTATCTCCCAACTTCTTTGCGTTGGACATACAAAAGATATTGTCGTAATCGATCTTTCCAGTAGCATAT
GTGGACGAAAACGAGAGAAGACATTGGTCATACCATACTATTCTCCCCTTATACCACGGACATCTCTTACGAAGCACAGCCATGGA
GGTGGCAAAGCAGTCGCGGCATTTGGGGCCATAGGAATCGCCACGGCACTGAAGGATAGCGGATAAGTCATCAGAGCCGAGCAGAG
CGAAACCTGGTTTATCGTTACTGTTTTTATAGAACATTCTTATGACTTTTTTTAAAAGTTCCTGGTAATCGCTTCCCGGCTTGTAT
TTTCCTTGACTATCCAAGCATTTGTGGTTGAGATACGCATTTGTAGTGTTTAAGGACAATTTGCCGCTTATAAAGAGAAGTTGTAT
GGCTAAGACATGAATCAAAATGAGGCGTTTTGATACAGATGATGAAGAGTACATTGTTCTGATTTATTTTTCTCAAAGAGGATTTT
TTCTAGATGATTAGTTGGGACTGATGTTTATGTAAGACTCAACAGGTATATGATGTTTATATATATAATATATTTTTCTGGTTACC
CAGTTCGCAATTTGTTTGAAAGGTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_188829 putative cysteine-rich repeat secretory protein 17 [Arabidopsis thaliana] | 679 | 5e-069 |
| Q9LRL9 RecName: Full=Putative cysteine-rich repeat secretory protein 20; Flags: Precursor | 543 | 3e-053 |
| Q9LRK9 RecName: Full=Putative cysteine-rich repeat secretory protein 28; Flags: Precursor | 508 | 3e-049 |
| NP_188837 cysteine-rich repeat secretory protein 29 [Arabidopsis thaliana] | 507 | 4e-049 |
| BAD43562 putative protein [Arabidopsis thaliana] | 503 | 1e-048 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LRM2 Putative cysteine-rich repeat secretory protein 17 | 679 | 2e-070 |
| Q9LRM3 Putative cysteine-rich repeat secretory protein 16 | 544 | 1e-054 |
| Q9LRL9 Putative cysteine-rich repeat secretory protein 20 | 543 | 1e-054 |
| Q9LJW1 Putative cysteine-rich repeat secretory protein 14 | 522 | 3e-052 |
| Q9LRK9 Putative cysteine-rich repeat secretory protein 28 | 508 | 1e-050 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q84JR6 Putative uncharacterized protein (Fragment) | 320 | 1e-027 |
| Q84JR5 Putative uncharacterized protein (Fragment) | 314 | 7e-027 |
| B9RXT6 ATP binding protein, putative | 302 | 2e-025 |
| B9T5Q2 DUF26 domain-containing protein 2, putative | 295 | 1e-024 |
| B9RPP7 DUF26 domain-containing protein 2, putative | 291 | 3e-024 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G21910.1 receptor-like protein kinase-related | 680 | 1e-071 |
| AT3G21990.1 receptor-like protein kinase-related | 507 | 2e-051 |
| AT4G20670.1 lipase | 503 | 5e-051 |
| AT3G21960.1 LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, petal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: receptor-like protein kinase-related (TAIR:AT2G31620.1); Has 915 Blast hits to 891 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 915; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 453 | 3e-045 |
| AT3G21960.2 beta-galactosidase | 453 | 3e-045 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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