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Information for unigene UN20111
| FASTA Sequence |
| Unigene ID: UN20111 | Length: 1642 |
| SNP | GGGAAAATGGTCGTCTCTGCTGACTTCAGAATCTCTCTCTCTGCCCCTAGCTGCCTACGCGGCTCCTCTGGCTTCACCAGGCACAT
TAATCTAGGGAGCTTCTGCAATGGGGAGTTCATGGGGAAGAAGCTCAACTTGGCTCAGCTTCGATCTTCTTCAACTAACTTCTCTC
AGAAGAGAATTCAAATGTCTTTAACCAGTGTAGCTGCAGACAGTAAGGTACAAGAAATTGAGTCTGAGAAAAGGGATCCAAGGACA
GTAGCTTCCATTATTCTTGGAGGTGGAGCAGGAACTCGACTCTTTCCTCTCACAAAGCGTCGCGCCAAGCCTGCTGTCCCTATCGG
AGGAGCTTATAGGCTGATAGATGTACCTATGAGCAACTGCATCAACAGTGGAATCAACAAAGTCTACATTCTCACACAATACAACT
CAGCATCACTGAACAGGCATCTAGCTCGTGCTTACAACTCCAATGGAGGTTTTGGAGATGGCTTTGTTGAGGCTCTTGCAGCCACT
CAAACGCCAGGAGAAACAGGTAAAAAGTGGTTCCAAGGTACAGCAGATGCGGTTCGGCAGTTCCATTGGCTTTTCGAGGATGCAAG
AAGCAAGGAGATAGAGGATGTGTTGATCCTCTCTGGTGATCACCTTTACAGGATGGATTATATGGATTTTGTACAGGATCATCGAC
AAAGCGGTGCAGATATAAGCATTTCTTGCATACCAATAGATGACAGACGTGCCTCAGATTTTGGTCTAATGAAGATAGATGAGAAA
GGAAGAGTTATCTCTTTCAGTGAAAAACCTAAAGGAGGTGACCTGAAAGCAATGGCTGTAGACACAACTGTTCTAGGTCTTTCCAA
GGAGGAAGCTGAAAAGAAACCATACATTGCGTCAATGGGGGTTTATGTTTTCAAGAAAGAGATACTGTTGAATCTCTTGAGATGGC
GTTTCCCAACGGCAAATGACTTTGGCTCAGAGATTATACCCTTCTCAGCTAAAGAGTTCTATGTAAATGCTTATCTCTTTAATGAC
TACTGGGAAGATATAGGAACGATAAGATCATTCTTTGACGCAAATCTCGCCCTCACTGAGCATCCACCTGCATTCAGTTTCTACGA
CGCAGCAAAGCCAATATATACATCAAGGAGGAACCTGCCACCATCAAAAATAGACGGCTCCAAGCTCATTGATTCGATCATTTCTC
ATGGAAGCTTCTTAACCAACTGCTTAATTGAGCACAGCATTGTGGGAATTAGATCAAGAGTAGGCAGTAATGTTCAGTTGAAGGAC
ACTGTGATGCTTGGGGCAGACTTCTACGAAACTGAAGCAGAAGTTGCAGCACTACTTGCTGAAGGAAAAGTTCCCATTGGAATAGG
AGAGAACACAAAGATTAAAGAATGCATTATAGACAAGAATGCTAGAGTTGGGAAGAATGTAGTTATCGCAAACTCGGAGGGAGTAC
AAGAAGCAGATAGGTCATCCGATGGGTTTTACATCAGATCAGGCATCACAGTGATCTTGAAGAACTCAGTAATTGCAGATGGAGTT
GTGATCTGAGACTTTTTAAGTTTTTAAAATTGTGAGAACTAAGAATTCAGAGCAGAAAAAGTCAAAACTATATTAATAAAGCATTT
ATTTGGTA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_197423 glucose-1-phosphate adenylyltransferase large subunit 1 [Arabidopsis thaliana] | 2442 | 3e-273 |
| BAA76362 glucose-1-phosphate adenylyltransferase [Arabidopsis thaliana] | 2438 | 1e-272 |
| XP_002873938 hypothetical protein ARALYDRAFT_488807 [Arabidopsis lyrata subsp. lyrata] | 2411 | 1e-269 |
| XP_002281069 PREDICTED: hypothetical protein [Vitis vinifera] | 2155 | 6e-240 |
| ACU20108 unknown [Glycine max] | 2123 | 3e-236 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P55229 Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic | 2446 | 5e-275 |
| P55243 Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic | 1964 | 4e-219 |
| P55230 Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic | 1709 | 1e-189 |
| P55233 Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic | 1684 | 1e-186 |
| Q00081 Glucose-1-phosphate adenylyltransferase large subunit 1 (Fragment) | 1634 | 7e-181 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6TE56 Glucose-1-phosphate adenylyltransferase | 2123 | 2e-236 |
| Q9AT08 Glucose-1-phosphate adenylyltransferase | 2122 | 3e-236 |
| B9HM68 Glucose-1-phosphate adenylyltransferase | 2114 | 3e-235 |
| B9RTX7 Glucose-1-phosphate adenylyltransferase | 2092 | 9e-233 |
| A3KCF9 Glucose-1-phosphate adenylyltransferase | 2074 | 1e-230 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G19220.1 APL1 (ADP GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 1); glucose-1-phosphate adenylyltransferase | 2460 | 1e-277 |
| AT1G27680.1 APL2 (ADPGLC-PPASE LARGE SUBUNIT); glucose-1-phosphate adenylyltransferase | 1710 | 9e-191 |
| AT2G21590.1 APL4; glucose-1-phosphate adenylyltransferase | 1563 | 1e-173 |
| AT2G21590.2 APL4; glucose-1-phosphate adenylyltransferase | 1563 | 1e-173 |
| AT4G39210.1 APL3; glucose-1-phosphate adenylyltransferase | 1561 | 2e-173 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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