 |
Information for unigene UN20113
| FASTA Sequence |
| Unigene ID: UN20113 | Length: 737 |
| SNP | GAAATAGAAAAATCAGAAAGAGATTGAGGAAATGATAGTTTATAATCGAGATAAATTTCTGCTTCTCTGTGTCTGAATTTGCATAA
TGTAATTGTAGCTAAAGCACATGAAGAACACTCAAATAACGAACAAGAAACAGCCAAAAAAGTCTGAGCAAAACACTGGGGGAGGG
GGAAGAAAGTAGAAAAACTAATAGCCACCCTTGAGATCGTTGACGACATCGTAAGGGATAGGAGTGACAGTCTCCAAGGTCATACC
CTCAACCATGAATCCTGGTTTGGGTCCTTTAGGCTGCCTCTTGGTGCTTATTGTCTCACCTTTGGCTTTAGCTGCAGCCTTGAGCT
CATCATTTTTCTTCTTCCTCAGCTTGAACTCCTCTGCGCACCTTGACTGCTGCACGTGTTCCACACGCACATGAAGCCTCTTCCTT
ATGATCCTGTTGCCAATCTGTTTATTGACTTCGACACCGACAGCACGTTTGGTGACGTTCCAGACACGACCGGTACGACCGTGGTA
GAACTTGTGAGGCATACCCTTGTGGATCGCACCATTCACCTTAACATCGACGTAGTCTCCGACCTTGAAGGTCCTGAGGTAGGTAG
ACAATGGAATTGTACCCTTCTTCCTGAACCCTCTCGCGAACAGATCTCTTGTCCTAGCACGAACTCCATGACCCGCCGGCATTTTT
TTCTCTCGAGTGGGACGCGAGAAGTGATAAACCTAAAATCGCCGACCCT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002889760 60S ribosomal protein L21 [Arabidopsis lyrata subsp. lyrata] | 847 | 9e-089 |
| NP_563847 60S ribosomal protein L21-1 [Arabidopsis thaliana] | 841 | 4e-088 |
| XP_002892517 60S ribosomal protein L21 [Arabidopsis lyrata subsp. lyrata] | 840 | 6e-088 |
| XP_002886727 60S ribosomal protein L21 [Arabidopsis lyrata subsp. lyrata] | 832 | 5e-087 |
| NP_564724 60S ribosomal protein L21-2 [Arabidopsis thaliana] | 826 | 2e-086 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q43291 60S ribosomal protein L21-1 | 841 | 2e-089 |
| Q9FDZ9 60S ribosomal protein L21-2 | 826 | 1e-087 |
| O82574 60S ribosomal protein L21 | 445 | 2e-043 |
| Q02753 60S ribosomal protein L21-A | 440 | 6e-043 |
| Q12672 60S ribosomal protein L21-B | 437 | 1e-042 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WSS0 Putative uncharacterized protein At1g57860 | 826 | 2e-086 |
| B9SYV4 60S ribosomal protein L21, putative | 788 | 4e-082 |
| A2XCC4 Putative uncharacterized protein | 779 | 5e-081 |
| Q10RZ3 60S ribosomal protein L21, putative, expressed | 779 | 5e-081 |
| A9PD39 Predicted protein | 777 | 8e-081 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
