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Information for unigene UN20115
| FASTA Sequence |
| Unigene ID: UN20115 | Length: 1975 |
SSR | | CTCTGCATTCTTGCTTGCAAATATAATGGGACGCTTCCCGTGGCTTACATGTCCCAGAGAGGACCTATCCACGGGCTGGCTCCAAT
GTGATCCGGGTCCCTTGTTCAAGCAAGAGACACATGCTTTACCAGGATGGATCTCCAACTGAATAAGACTAGTCATTGTACACTAC
TGAAAAAATTACAGGGAGCAACTTTCATTACTTCTAAAAAGAGTAAGGCGTTTACACTTTGTAGTTGCCTTGGAAAGAAATTTCTG
TTTTACCAGTTCAGTGGCATGCTCTATGTCTTGGATTATTTGCGTCTATAATAGCACCTTTTGGTGGCTTCTTTGCCAGTGGTTTC
AAAAGAGCTTTCAAAGTCAAGGACTTTGGTGATAGTATTCCCGGTCATGGTGGAATCACAGATAGAATGGATTGTCAGATGGTGAT
GGCTGTTTTTGCATACATATACCATCAATCCTTTGTTGTACCTCAAAGCCTCTCTGTGGATAAGCTCTTAGACCAGATAATCACAA
GCCTGACACTGGAGGAACAACAAGCTCTGTTCATGAAGCTTGTCCAAATGTTGCAGGAGAAGGTTACTGGATCTTAGATCATTACA
AGTTTACCCTACCATGTTATATACTCTGCGTGTGTTTCCAAAAAAAAAAAGATCATTTGGATACAAAAAGAAAAGAAAGCAATAGA
TTCATAAGTTTGTTGCGTTTCCACCTTGGTTAAGCCTCTGTATAGTAAGAAGAATGTAATATGATTTTCATGACACAATAAATATA
GAACACAAGGGTGTCTCAGCAAAGCTAAAAATCAATTCTTCTTAAGATCATCATCATTCCCAATAAAAAATAATACAAGAAAAAAG
AATCTAGACTTCTGTATCTAGAGAGTTTTACTTCCAAAAAAAAAAAATATAATAAAGGTCTTCTTCTGGGCACTTTCTTCCTCCCA
ATCTTTCTCACTGTTCCTTCGGCTTCTCGATCTTGACATAAGGAAGAACTCCCAGAAAGTACTTCACCTTCGGATTCCATCCACGT
TGCTGAGCTCGACAGAACATCAAGAACGTGTTCGCGCAGTAAGAGTTGAAACTCATGAAGACATGCCAGAGAGCATGTCCCTGAGG
ATTCACAGGCCACTGAGATATCGTCTTGCAGAACACACGGTCACAGAACCAGCACACGCTTCCCACTAGGATCGTAGCGACGTACC
ACTTGGCAATTCTTTTGGCCGCGGTGTCCTCGGTGTGAATGTAGTACTTGTACATCCGAGGGATGCAGAGAAGGCAGAGGATCACG
TAGTGGACCTTGAAACCGATGCCGAACCTGAGGTAAGCGTGGACCGCGGCGAAGGCAGCACCGTAGAGGAAGAGAAAAGTGGGCAT
GGTGCTTCTGTAATGCCAGTCCGGAGAGTAGAGGATGTACATGTAGAGAAGTATCTCCCACACCATTGGTGTCTCATCACTCTGTT
GTTGCACGTGCTGCAAAGTGGCATGGTAGAGCATGCTGCCGATAGCAAGGATCATGTTGGAGATGTGAAGGATGCTAAACCTCTTC
TCAAAGCGTTGCCTAATGGCATTGACAAGACCAATGAGAGCGAGAAGGATTCCAGGGAGACCGGAGATGGTGTTGTAGAACTCAGC
GATGTAAGAGGAGTAGGCGTAGTTCTTCTCACAACACTCAATAGTAGAGGTCACAGGACCCCAAAAACTCGACATCCCATCTGCCA
TTTTGCTATCCTCCTCTCAGTATGAATCTTACTCCACTCCTCCCTTTAGACACGTTTTTTTTTAACTTTCTCCTGGCGATGATGAT
GATGATGATGATGATGAGGCAGACAAAGAAGATCTATCTCCTTCCTTCCTTCTTTTCACCCAGCGAAATCTCTTAGTAGATCGAAG
GGAATCAGATGGATAGATGGCTTATCTCTCTCTCTCTCTCTCTCTCTTTCTCTCCCGATCGTTTCTCTTCTTCTTCGGCTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_567660 dihydroceramidase [Arabidopsis thaliana] | 1361 | 1e-147 |
| XP_002869828 ATCES1 [Arabidopsis lyrata subsp. lyrata] | 1359 | 2e-147 |
| CAA16783 putative protein [Arabidopsis thaliana] | 1279 | 3e-138 |
| XP_002331534 predicted protein [Populus trichocarpa] | 1199 | 6e-129 |
| XP_002518399 alkaline phytoceramidase, putative [Ricinus communis] | 1194 | 2e-128 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O04928 Phosphatidate cytidylyltransferase | 529 | 1e-052 |
| O04940 Phosphatidate cytidylyltransferase | 488 | 7e-048 |
| Q9NUN7 Alkaline ceramidase 3 | 314 | 1e-027 |
| Q9P381 Putative phosphatidate cytidylyltransferase | 308 | 5e-027 |
| P38221 Phosphatidate cytidylyltransferase | 300 | 4e-026 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q94IB9 Acyl-CoA independent ceramide synthase | 1361 | 6e-148 |
| O49638 Putative uncharacterized protein AT4g22330 | 1279 | 2e-138 |
| B9N8I5 Predicted protein | 1199 | 4e-129 |
| B9RXD0 Alkaline phytoceramidase, putative | 1194 | 2e-128 |
| B9P606 Predicted protein (Fragment) | 1178 | 1e-126 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G22330.1 ATCES1; catalytic/ hydrolase, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 1362 | 3e-150 |
| AT4G22340.1 phosphatidate cytidylyltransferase, putative / CDP-diglyceride synthetase, putative | 577 | 3e-059 |
| AT4G22340.2 phosphatidate cytidylyltransferase, putative / CDP-diglyceride synthetase, putative | 577 | 3e-059 |
| AT4G22340.3 phosphatidate cytidylyltransferase, putative / CDP-diglyceride synthetase, putative | 577 | 3e-059 |
| AT1G62430.1 ATCDS1; phosphatidate cytidylyltransferase | 529 | 1e-053 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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