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Information for unigene UN20122
| FASTA Sequence |
| Unigene ID: UN20122 | Length: 1699 |
SSR | | GGAAGGAGAGAGAGAGAGAGAGCTAAGCAGTAGAGATAAGGAAACAAAAAAAAATGGCGATTCCAATGCCAACTCGACAGCTATTC
ATCGACGGCGAGTGGAGAGAGCCAATCTTGAAGAATCGCATCCCCATCGTCAATCCAGCTACCCAAGATGTCATTGGTGATATCCC
GGGGGCAACAAAGGAGGATGTGGAAGTTGCAGTCAACGCTGCTCGAAGAGCTTTCTCAAGGAACAAAGGTAAAGACTGGTCCAAAG
CACCTGGAGCTCTTCGCGCCAAGTATCTACGCGCTATTGCTGCTAAGGTGACTGAAAGGAAGTCGCATCTGGCAACGCTTGAGTCG
CTTGACTCTGGTAAACCTTTGGATGAAACTCTTTGGGATATGGAGGATGTTGCTGGGTGTTTTGAGTTTTATGCTGACCTTGCTGA
AGGCTTAGATGCTAAGCAGAAGGCGCCTGTTTCTCTTCCCATGGAGAGTTTTAAGAGTTATGTTCTCAAGCAACCTCTTGGAGTTG
TGGGACTCATCACGCCTTGGAATTACCCACTTCTGATGGCTGTTTGGATGGTGGCTCCTTCGCTTGCTGCTGGATGTACTGCGGTT
CTCAAGCCATCAGAGCTCGCTTCTGTCACTTGTTTGGAGCTTGTTGATATTTGTCGTGAGGTTGGTCTTCCTCCTGGTGTCCTCAA
CGTTCTTACTGGATATGGTTCGGAAGCTGGTGCTCCTTTGGCTTCACATCCCAATGTCGACAAGATTGCTTTTACCGGAAGTTTTG
CCACGGGAAGCAAGGTCATGACAGCTGCTGCTCAGTTGGTGAAGCCTGTTTCGATGGAGCTGGGCGGGAAGAGCCCTCTCATTGTG
TTTGATGACGTTGATCTTGATAAAGCTGCTGAATGGGCTCTCTTCGGTTGCTTCTGGACAAATGGTCAGATCTGCAGTGCAACTTC
CCGCCTTCTTGTTCATGAAAACATCGCATCTGAATTCATAGAAAAGCTTGTAAAATGGAGCAAGAACATTAAAGTTTCTGACCCCT
TGGAAGAAGGATGCAGGCTTGGTCCTGTTGTCAGCGAAGGACAGTACGAGAAAATATTGAAGTTTATCTCAACGGCTAAAAGTGAA
GGGGCAACGATTTTACATGGTGGTTCCCGACCTGAGCATCTGAAAAAGGGCTTCTTCATTGAACCAACCATCATAACTGATGTAAC
CACTTCAATGCAAATTTGGAGGGAAGAAGTTTTCGGGCCTGTTCTTTGCGTGAAAACATTCTCCAGTGAGGATGAGGCAATTGAGC
TAGCAAATGATTCCCATTACGGATTAGGAGCTGCAGTGATATCTAATGACGCTGAAAGATGTGACCGCATAAGCCAGGACTTTGAA
GCTGGGATTGTGTGGATTAACTGCTCACAGCCATGCTTTACTCAAGCTCCATGGGGTGGAGTCAAACGCAGTGGGTTTGGACGCGA
ATTAGGAGAATGGGGACTTGATAACTACTTGAATGTGAAGCAAGTGACTCTCTACACATCAAACGACCCGTGGGGATGGTACAAAC
CCCCTTGCTAAGTAATGGATGTATACGTTGTCATGAAAACGGAAAACCAAATGCTGTCTGTGTGCTTCTGTTTTTATCAGTCTTGT
CTGTTTGTGGAACGTTTTGAGTAAAAAAAGTAAAGACGATATGAATAAAGTCAGCTTTGGTGATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_565094 betaine aldehyde dehydrogenase 1 [Arabidopsis thaliana] | 2484 | 5e-278 |
| AAV67891 betaine-aldehyde dehydrogenase [Chorispora bungeana] | 2483 | 6e-278 |
| XP_002889000 ALDH10A8 [Arabidopsis lyrata subsp. lyrata] | 2451 | 3e-274 |
| NP_001185399 betaine aldehyde dehydrogenase 1 [Arabidopsis thaliana] | 2420 | 1e-270 |
| ADW80331 betaine-aldehyde dehydrogenase [Corylus heterophylla] | 2267 | 7e-253 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9S795 Betaine aldehyde dehydrogenase 1, chloroplastic | 2484 | 2e-279 |
| Q9STS1 Betaine aldehyde dehydrogenase 2, mitochondrial | 2198 | 3e-246 |
| O04895 Betaine aldehyde dehydrogenase, chloroplastic | 2152 | 6e-241 |
| P28237 Betaine aldehyde dehydrogenase, chloroplastic | 2121 | 2e-237 |
| P17202 Betaine aldehyde dehydrogenase, chloroplastic | 2108 | 8e-236 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q5Q033 Betaine-aldehyde dehydrogenase | 2483 | 4e-278 |
| B9IEL4 Predicted protein | 2258 | 5e-252 |
| B9I351 Predicted protein | 2248 | 8e-251 |
| B2BBY6 Betaine-aldehyde dehydrogenase | 2247 | 1e-250 |
| Q6S9W9 Betaine-aldehyde dehydrogenase | 2237 | 1e-249 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G74920.1 ALDH10A8; 3-chloroallyl aldehyde dehydrogenase/ oxidoreductase | 2484 | 2e-280 |
| AT3G48170.1 ALDH10A9; 3-chloroallyl aldehyde dehydrogenase/ oxidoreductase | 2198 | 3e-247 |
| AT3G24503.1 ALDH2C4; 3-chloroallyl aldehyde dehydrogenase/ aldehyde dehydrogenase (NAD)/ coniferyl-aldehyde dehydrogenase | 1017 | 2e-110 |
| AT3G48000.1 ALDH2B4 (ALDEHYDE DEHYDROGENASE 2B4); 3-chloroallyl aldehyde dehydrogenase/ ATP binding / aldehyde dehydrogenase (NAD) | 905 | 2e-097 |
| AT1G23800.1 ALDH2B7; 3-chloroallyl aldehyde dehydrogenase/ aldehyde dehydrogenase (NAD) | 861 | 3e-092 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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