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Information for unigene UN20128
| FASTA Sequence |
| Unigene ID: UN20128 | Length: 1305 |
| SNP | GGACATTAACGATTAACATCACCAAAGACATTACTTAAGTTGCGAGTTAAGAAAACAGTGACTTTACAAGTTTATATTGAGAGAGT
CCAGAGTAATGGAGAAGAACATCAAGTTTCCTGTTGTAGACTTGTCTAAGCTCAATGGTGAAGAGAGAGACCACACCATGGCTTTG
ATCGACGATGCTTGTCAAAACTGGGGCTTCTTTGAGCTGCTAAACCATGGAATACCATATGATCTAATGGACAACATTGAGAGGAT
GACTAAGGAACACTACAAGAAGTTTATGGAACAAAAGTTTAAGGAAATGCTTCGTTCCAAAGGTTTAGATACTCTTGAGACCGAAG
TGGAAAATATCGATTGGGAAAGCACTTTCTTCCTTCGCCATCTCCCTCAGACCAATCTTTATGACATCCCTAATATGTCAGAAGAA
TACCGAGCGGCTATGAAAGATTTTGGGAAGAGGCTAGAGAACCTAGCAGAAGAACTGTTGGATTTGCTGTGTGAGAATCTAGGATT
GGAGAAAGGGTATTTGAAGAAGGTGTTTCGTGGTACGAAGGGTCCAACTTTTGGGACAAAGGTTAGCAACTATCCACCATGTCCTA
ATCCTGAAATGGTCAAAGGTCTTAGGGCCCACACAGATGCAGGAGGCCTCATCTTGTTGTTTCAAGACGATAAAGTCAGTGGCCTT
CAGCTTCTCAAAGATGGTGTCTGGGTTGATGTTCCTCCACTCAAGCACTCCATTGTCATCAATCTTGGTGACCAACTTGAGGTGAT
AACAAACGGGAAGTACAAGAGCGTAATGCATCGTGTAATGACTCAAAAAGAAGGAAACAGGATGTTTATTGCGTCGTTCTACAACC
CTGGAAGCGATGCCGAGATCTTTCCGGCGCAGTCTCTTGTGGGCAAAGAATCGGAGTACCCGAGTTTTGTGTTTGACGACTACATG
AAACTTTATGCCGGAGTCAAGTTCCAGCCTAAGGAGCCACGGTTTGAGGCCATGAAAAATGCTGCAGCAACCAAGGATGCGAATCC
GGTTGCCGCGGTGGAGACATTCTAATTGGAAGTGGGGTATTCTATGAAGGCAAGAAAGATGAAAAATAACAAAGTGGGTTTGATGT
GTGGGTAATAACGCAATAAGTATTGAAGTTAATGTTATTAGAAGCAAAAACTAAGTGACTAGTGATCACTGGTGTGGTTAAGTAAG
TGTGGGGGTGTTTTTAAAACATATGAATATTGAAAAAAAGACTTAAAATGAATATTAAAAGTTGCAATATTATAAAGATCAGAAAC
GTTGATCATTTCATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAA57285 ACC oxidase [Brassica oleracea] | 1584 | 8e-174 |
| CAC39107 ACC oxidase [Brassica rapa subsp. rapa] | 1574 | 1e-172 |
| AAA32981 amino-cyclopropane-carboxylic acid oxidase [Brassica napus] | 1570 | 3e-172 |
| XP_002889907 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1536 | 3e-168 |
| NP_172665 aminocyclopropanecarboxylate oxidase [Arabidopsis thaliana] | 1516 | 6e-166 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q09052 1-aminocyclopropane-1-carboxylate oxidase | 1461 | 6e-161 |
| Q08507 1-aminocyclopropane-1-carboxylate oxidase 3 | 1240 | 3e-135 |
| Q43792 1-aminocyclopropane-1-carboxylate oxidase | 1238 | 4e-135 |
| P31237 1-aminocyclopropane-1-carboxylate oxidase | 1228 | 6e-134 |
| P05116 1-aminocyclopropane-1-carboxylate oxidase 1 | 1226 | 1e-133 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q43405 ACC oxidase | 1584 | 5e-174 |
| Q94IN6 ACC oxidase | 1574 | 8e-173 |
| Q39316 Amino-cyclopropane-carboxylic acid oxidase | 1570 | 2e-172 |
| O65378 At1g12010/F12F1_12 | 1516 | 4e-166 |
| Q43404 ACC oxidase | 1471 | 7e-161 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G12010.1 1-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putative | 1517 | 2e-168 |
| AT1G62380.1 ACO2 (ACC OXIDASE 2); 1-aminocyclopropane-1-carboxylate oxidase | 1453 | 4e-161 |
| AT1G05010.1 EFE (ETHYLENE-FORMING ENZYME); 1-aminocyclopropane-1-carboxylate oxidase | 1202 | 6e-132 |
| AT2G19590.1 ACO1 (ACC OXIDASE 1); 1-aminocyclopropane-1-carboxylate oxidase | 806 | 5e-086 |
| AT1G77330.1 1-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putative | 778 | 8e-083 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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