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Information for unigene UN20149

FASTA Sequence
Unigene ID: UN20149Length: 1280 SSRSNP
GGGAAAAGCAAAAAAAAAGGAGTAGAGTTAACCAATATAATAACTAAAAAAACAAAGAAGATTGTAAGATAAAGCTGATTTGAAGT
TCACATTGCAAGAAGAGAATCTGCTTATAACAAAAGAAAGAGAGATATAAGAGAAGACCTTGCTAAGTCTTTGGTTTCTTCTTGAT
AACACAACTACTACTATGTACAGATTCAGCAACACAGTGATAGGAGTCTTAAACCTCCTCAGCTTACTAGCTTCAATACCAATCAT
AGGAGCCGCTCTATGGAAGGCAAGAAGCAGCACAACTTGCGAGAACTTCCTCCAAACTCCTCTACTCGTTATAGGTTTCATCATAC
TCTTAGTATCCCTCGCCGGGTTCATAGGAGCATGTTTCAACGTGGCATGGGCTCTTTGGGTTTACTTAGTGGTCATGATTTTCCTC
ATCGCGACTCTTATGGGTCTAACTCTGTTTGGTCTGGTGGTGACGAGCCAAGGAGGTGGTGTGGAAGTACCAGGGAGGGTTTATAA
AGAGTACAGGCTTGGAGATTATCATCCATGGCTGAGAGAAAGAGTTAGAGATCCTCAGTATTGGATCTCTATAAGAAGCTGTATCT
TGAGTTCCAAGACTTGTGCTAAGATTGAATCTTGGACTACACTTGATTACTTCCAAAGAGACATGACTTCTGTTCAGTCGGGATGT
TGTAAGCCACCGACGGCGTGCACGTACGAGACCGGAGTAATAGTAGGAGGAGATGATTGCTATAGATGGAACAATGGTATTGAAAC
GTTATGCTACGAGTGTGATGCTTGTAAAGCTGGTGTTCTTGAGGAGATCCGTCTTGACTGGAGAAAGTTGTCGGTGGTTAACATTT
TGGTCCTTGTCCTCCTCATCGCTGTCTATGCTGCAGGTTGCTGCGCCTTCCACAACACTCGCCACGCAGCACATCCTTATCATCCT
TCTGATGATAATCGCATGACTAAAGTCCGTCCTCGTTGGGACTACTACTGGTGGAGATGGTGGCATGAGAAGAAAGAGCAGCTTTA
CTGAGAGAGCAGCCACATCGCTTGTGTTTTCATATTTTCATCATTATCTGTTTACCAAACCAGCTTGAGATTAAGAAAACACAAAT
CTAAGAAATGTTGATGTACTTCTGTTTTCTATAGTTCATCAAGAGATGTAGTAAAAGTTGTTCTGATCTCAGAAGAAACAAAAGGA
AACATACATGGAAGATCGATCAATAGAGAGTCAGAGACTATGAACAAGTTGAATATATATATATTGAATTTCAATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884881 hypothetical protein ARALYDRAFT_478564 [Arabidopsis lyrata subsp. lyrata]14862e-162
NP_566411 tetraspanin6 [Arabidopsis thaliana]14791e-161
BAB01957 senescence-associated protein-like [Arabidopsis thaliana]13974e-152
XP_002276217 PREDICTED: hypothetical protein [Vitis vinifera]11626e-125
ACU19249 unknown [Glycine max]11313e-121

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9C7C1 AT3g12090/T21B14_11014798e-162
Q9LH57 Senescence-associated protein-like13972e-152
C6TBP7 Putative uncharacterized protein11312e-121
B9T8I0 Putative uncharacterized protein (Fragment)11275e-121
C6TIE3 Putative uncharacterized protein11267e-121

Arabidopsis top hits (Blast detail)Scoree value
AT3G12090.1 TET6 (TETRASPANIN6)14803e-164
AT5G60220.1 TET4 (TETRASPANIN4)5781e-059
AT4G23410.1 TET5 (TETRASPANIN5)5592e-057
AT4G30430.1 TET9 (TETRASPANIN9)4472e-044
AT2G23810.1 TET8 (TETRASPANIN8)4427e-044

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
103  33%
 
93  33%
 
82  22%
 
181  11%

Unigene MembersMember information