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Information for unigene UN20154

FASTA Sequence
Unigene ID: UN20154Length: 576 SSR 
GGATATTTATTCTTTCCGAGTCTCTCTCTCTCTATCTCAATTCTGCAATCGCGGCGAATCTCTCTCAGGACTTGATCGGAGCGTTT
GATCTGATAAAAGGAAGATGTCGGCTACTCAGGAAGAAGACAAGAAGCCCGGTGAACAAGGAGGAGTTCACATCAATCTCAAAGTC
AAGGGCCAGGATGGAAATGAAGTCTTCTTTAAGATCAAGAGGAGCACTCAGCTGAAGAAGCTAATGAACGCTTACTGCGACCGTCA
ATCTGTGGATCTCAACGCAATTGCTTTCTTGTTTGATGGGCGTCGTCTCCGTGCGGAGCAGACTCCAGATGAGCTTGATATGGAAG
ATGGAGATGAGATCGATGCAATGCTCCATCAGACCGGTGGTGTTGCAAGTGGAGGCATGTATCTGTTCTGATTTTAGTTGGTCTTT
TATGGTTTTCGATAATATGTTGTGATATATAATTAATGGACAGTTTTCAATAAGACGATGGTGACATTATTATTAGATCCTATGAT
AACAATACCAATGGAATGGGCTTTGCTTTATGGATTTTCTATTGATTAAAGTAGTAGCTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAA67923 ubiquitin-like protein [Arabidopsis thaliana]4659e-045
NP_194414 small ubiquitin-related modifier 1 [Arabidopsis thaliana]4505e-043
XP_002458989 hypothetical protein SORBIDRAFT_03g043870 [Sorghum bicolor]4461e-042
NP_200327 small ubiquitin-related modifier 2 [Arabidopsis thaliana]4407e-042
XP_002869590 hypothetical protein ARALYDRAFT_492116 [Arabidopsis lyrata subsp. lyrata]4407e-042

Swiss-Prot top hits (Blast detail)Scoree value
P55852 Ubiquitin-like protein SMT34503e-044
P55857 Ubiquitin-like protein SMT34395e-043
O13351 Ubiquitin-like protein pmt3/smt32792e-024
Q9Z172 Small ubiquitin-related modifier 32381e-019
Q5XIF4 Small ubiquitin-related modifier 32362e-019

TrEMBL top hits (Blast detail)Scoree value
Q547B9 Small ubiquitin-like modifier 14504e-043
C5XG88 Putative uncharacterized protein Sb03g0438704461e-042
Q9FLP6 AT5g55160/MCO15_114405e-042
A2WYE1 Putative uncharacterized protein4397e-042
Q0JGK7 Os01g0918300 protein4397e-042

Arabidopsis top hits (Blast detail)Scoree value
AT4G26840.1 SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1); protein binding / protein tag4557e-046
AT5G55160.1 SUMO2 (SMALL UBIQUITIN-LIKE MODIFIER 2); protein binding / protein tag4503e-045
AT5G55160.2 SUMO2 (SMALL UBIQUITIN-LIKE MODIFIER 2); protein binding / protein tag3591e-034
AT5G55170.1 SUMO3 (SMALL UBIQUITIN-LIKE MODIFIER 3); protein binding / protein tag2495e-022
AT5G55856.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein modification process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626); BEST Arabidopsis thaliana protein match is: SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1); protein binding / protein tag (TAIR:AT4G26840.1); Has 781 Blast hits to 780 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 477; Fungi - 93; Plants - 124; Viruses - 1; Other Eukaryotes - 86 (source: NCBI BLink).2155e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  33%
 
81  17%
 
92  33%
 
181  17%

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