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Information for unigene UN20159

FASTA Sequence
Unigene ID: UN20159Length: 1222 SSR 
GCGTACTTTGATGAATTTCTTTATATATATATATATATAAGCGCTCCTCTTCATGTTCACATCTGTTCTCATCAGACAAAAACAAC
ATACGCAAAATAAAACATATCTAAAGTTAACTAAGACACCGCGGAGAAGTCTATACAACTGACTCTGCCACCATAACAACTTGTCT
TCATCATCTCTCCGATCTTCTCTTAGTTTTGGAACAGCACCATACAGACACTAATCACAACCATGACGACATAGACAATCAAAAAA
AAAAACCTAACTTACTAAAAATCTGCACCAAAGAGCTCCCAAGTTATGACTAACTTGCCAGTCCCCCTCTGTGGCTTTGTTACCCA
TGAGAACCTCGACATTATCTTTTTCTGCGCTTCGTTTCCACCTTGACAACATCATCAGCTGGAGATGCGGAGAACCCGTTCTGCGA
TTTCTTGACATCATCATCAGAGCTGCATTCAGCACACACAAAGTGGTCAAGCTTCTTTGCTTCTTCAATCGTCATGCCTACACACG
CAGGATGATACCAGTCTTTGCAGCCTTCACATTGCACCATGAGATCGTCTGGATTATACGGCATTTCACATTTGCAGTACACAGCA
ACACGGTCAGGGGTAAAAGCACCAGTAGCAGCCTTGTACTCGAACCTACAATAATAATCCTCAGCGCCAACGTTCTCAAGCCTGGT
GTAGTTTTTGAAGGTGTGAACAATGCATTTTCCTTCAATGGTGTGTGCGCTCTGAACGTCGAAATGGTCAGACAAGAAAAGCTCTT
TGGCTCCATGGAACTGTCTCCTACCGCCAAGTGACTCCTCGGGGCGGTAATACCACCGACAGTGCACCTTCACGTTGTTCCTAGCG
TCGGCTTCGATCTTCTCGACACGTGCCACGTACGGTGGCTTGCCAGCATCTGAGGGACGCATCAACACACAATCTCCAGCTCTGAC
GAGTTTGTTGGTGCCTTTGATGGTGTAAGAGTCGAGCTCTTTCCTCCCAGTTTTGATTTTCGAGGGGACACCTGGTCGAGTTTTCG
CCATGGTTAGCTTTTTTGTGTTTGGTCGTCTACGTACCTTGAAATGTACAGAGATTGAAGATCCAAGGATGTGTAGATCGATGAGA
AGAGAGTAAATCTGGAACCCTAGATTCTCTTCTGGTGAAGAAGAAGATGAAGAAGAAGAAGAAAGAAGAAGAAGAAAGAAGAAGGT
GAGTCCTTTGCAATCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_001031695 PHD finger and bromo-adjacent homology domain-containing protein [Arabidopsis thaliana]11913e-128
NP_193945 PHD finger and bromo-adjacent homology domain-containing protein [Arabidopsis thaliana]11644e-125
XP_002867787 DNA binding protein [Arabidopsis lyrata subsp. lyrata]11582e-124
XP_002872686 hypothetical protein ARALYDRAFT_327388 [Arabidopsis lyrata subsp. lyrata]10481e-111
XP_002518423 phd finger transcription factor, putative [Ricinus communis]10462e-111

Swiss-Prot top hits (Blast detail)Scoree value
Q9WTU0 PHD finger protein 21561e-009
O75151 PHD finger protein 21552e-009
Q3UWM4 Lysine-specific demethylase 71425e-008
Q6ZMT4 Lysine-specific demethylase 71381e-007
Q08D35 Lysine-specific demethylase 71335e-007

TrEMBL top hits (Blast detail)Scoree value
Q56W44 Receptor like protein11912e-128
B9RXF4 Phd finger transcription factor, putative10461e-111
B9HZB2 Ebs-bah-phd domain-containing protein10442e-111
B9N8F2 Ebs-bah-phd domain-containing protein10442e-111
C6T7C3 Putative uncharacterized protein10253e-109

Arabidopsis top hits (Blast detail)Scoree value
AT4G22140.2 DNA binding / protein binding / zinc ion binding11972e-131
AT4G22140.1 DNA binding / protein binding / zinc ion binding11641e-127
AT4G04260.1 bromo-adjacent homology (BAH) domain-containing protein7626e-081
AT4G39100.1 SHL1 (short life); transcription factor/ zinc-mediated transcriptional activator7241e-076
AT4G23120.1 bromo-adjacent homology (BAH) domain-containing protein1263e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  29%
 
111  14%
 
92  29%
 
102  29%

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