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Information for unigene UN20170
| FASTA Sequence |
| Unigene ID: UN20170 | Length: 1370 |
SSR | SNP | GGACGACAATTAATTCTTTTGAAGTTTCCGACAGAACAGGTTTGCGATATTGAAAGACAAACGCGTCTTCCTAACCCATTGCCTCT
TCTTCTGTATATTATCCACAGTTTATGTTTCTCTCTCTCTCTCTCTGTGGTTCATAATCATAAAGTTCATTGCTTATTTCTTCGCG
GCGTCGTCTGTTTTAAGTTTTAACTCTTTGAGTTTCAATTCACACTGCTTCTAAGACTCGATCTCTTTGCCTCATTATTCCCCAAT
GGTCTTTGGATCGTTCTTCTCTTCTCTCAAGTTCTGGGGAAATTCTCAGGAACAAGAACGGCAGAGAGGGAGGATGCAGGAGATAG
ATCTCAGCATTCACACGATAAGAAGCCATGGAGGCAGCGTCGCCTCTAAACACAAGCACGACTGGATCATACTCGTGATCTTGGTG
GGCATCGAGATCGGTCTGCAGCTCATATCTCCTTTCTACAGATACGTCGGGAGAGACATGATGACTGATCTCAAATACCCTTTCAA
CGACAACACCGTCCCTATCTGGTCGGTACCGATCTACGCAGTCCTGCTCCCGATCATAGTGTTCGTCTGCTTCTACATGAAGAGAA
CGTGCGTCTACGATCTTCACCACAGCATTCTCGGACTGCTCTTCACGGTTTTGATAACCGGTATCATCACCGACTCCATCAAGCTC
GCCACGGGACGCCCTCGTCCTAACTTCTACTGGCGTTGCTTCCCTGACGGGAAAGAGGTGTTCGACGCGTTGGGTGGTGTGATATG
CCATGGTAAACCAGGAGAGGTCAAAGAAGGTCACAAAAGCTTTCCCAGTGGACACACGTCTTGGTCTTTCGCTGGACTTGGTTACC
TCTCTCTTTACTTGTCTGGTAAAGTCAAGGCTTTCAACAGGGAAGGACACGTGGCTAAGCTCTGCCTAGTGTTCGCTCCTCTCCTC
GCGGCTTGCCTCGTGGGGATATCGCGTGTGGATGACTACTGGCATCATTGGCAAGACGTCTTTGCTGGAGCTCTTATTGGCCTCTT
TGTGGCTGCCTTCTGTTACCGTCAGTTCTATCCTAATCCTTACCATGAAGAAGGGTGGGGTCCTTATGCGTATTTCAGAGCGGCTC
AGGAACGTGGACAAGCGCAAAATGGAGATGCGTTGAGGACAATGTCTCTGCAGGTGGAATCAACTTCTCTTGAAAACATGGAATCT
GGCACTAACTCCGTTCGAAGATGATTAGTTATTCCTCTTTTTTCAGCATTTGATTCATTATTTGGTATTTTTCATTTTGGTCGTTG
TGACGGGTGTGGATGATGTAGTTGCATACGAAACTTTTACTTGTACTCTTACCATTGTAAGTAAATCTACTCTTCATATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_565255 Lipid phosphate phosphatase 1 [Arabidopsis thaliana] | 1548 | 1e-169 |
| AAL06503 At2g01180/F10A8.6 [Arabidopsis thaliana] | 1546 | 2e-169 |
| AAM63082 putative phosphatidic acid phosphatase [Arabidopsis thaliana] | 1534 | 5e-168 |
| XP_002876735 ATPAP1 [Arabidopsis lyrata subsp. lyrata] | 1530 | 2e-167 |
| NP_973389 Lipid phosphate phosphatase 1 [Arabidopsis thaliana] | 1449 | 4e-158 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ZU49 Lipid phosphate phosphatase 1 | 1548 | 5e-171 |
| Q8LFD1 Putative lipid phosphate phosphatase 3, chloroplastic | 1044 | 1e-112 |
| Q9XI60 Lipid phosphate phosphatase 2 | 987 | 6e-106 |
| Q6GQ62 Phosphatidate phosphatase PPAPDC1B | 407 | 1e-038 |
| Q3UMZ3 Phosphatidate phosphatase PPAPDC1B | 395 | 3e-037 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q3EC91 Uncharacterized protein At2g01180.2 | 1449 | 3e-158 |
| B9SJW9 Phosphatidic acid phosphatase, putative | 1149 | 2e-123 |
| C6TDH4 Putative uncharacterized protein | 1118 | 6e-120 |
| B9HWC7 Predicted protein | 1106 | 2e-118 |
| B9SQ05 Phosphatidic acid phosphatase, putative | 1100 | 8e-118 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G01180.1 ATPAP1 (PHOSPHATIDIC ACID PHOSPHATASE 1); phosphatidate phosphatase | 1549 | 4e-172 |
| AT2G01180.2 ATPAP1 (PHOSPHATIDIC ACID PHOSPHATASE 1); phosphatidate phosphatase | 1450 | 1e-160 |
| AT3G02600.1 LPP3 (LIPID PHOSPHATE PHOSPHATASE 3); phosphatidate phosphatase | 1044 | 1e-113 |
| AT3G02600.2 LPP3 (LIPID PHOSPHATE PHOSPHATASE 3); phosphatidate phosphatase | 1042 | 2e-113 |
| AT3G02600.3 LPP3 (LIPID PHOSPHATE PHOSPHATASE 3); phosphatidate phosphatase | 1037 | 8e-113 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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