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Information for unigene UN20171
FASTA Sequence |
Unigene ID: UN20171 | Length: 1089 |
| SNP | CAAAGAACAAATATTATATAAGACAATAAATATCACTCAACACACTTTTTAATCTTAAATTCACTTCCACAAGACGGTACAAAAGA
AAATCACTTTTCACAATTATTACAACAACATTTGCTTGCGAGCAAAGAACATTGAAATTTGAAACACAACGCAAAGTACATACGTG
AAGTATAACTTTACCATCTCACTTAGACACTTATTATTTCACCTTAAACACAAACGTCACATATAATTTGCAACCTTACATGTGTG
TGCATAGAGTTTCTTAGCAGCCAAGGTTAGAACCAGGGTCGACACCAAGCTGTCCACAATAGTTTCTATAGTAACTAATCCTTGCA
TTGACGGCACCCGGGTTCCCACCGTTACACTCCATTCCATTGATAGCTCTAATGGTCGCTCCAAACCCTTGGTTCAGTACCGGTCT
TACGCTATTCATCCAAAACCAGAGACCTGTCCTGAAAGCCACAGTTGGGTTGCTACCCACTAGTTCTGGCTGGCGTAGGAGATTAA
GGCCGAGACTCTGGCCGCATGCTCCGTAATTGTAGTTCCATGATAGCTGGATCGGTCCACGACCGTAGTAGCCTTTACCCGGTGCA
CATGGGTATTGCCTGTTGTTCTCGTCGCAGTAGTCTCGTGACGCTCCGTTTATTTCTTCTATATAGCAGAAGTGTCCTGTCTCGTG
AGTGAAATGAGCAAACATGGTTGCAATTTCACGCCTAGTAACGGAACTAGCAAAGTTTGGGAATGTATTAGCAGCGTTGACGAAAG
AGTCGCGGGTGTAGAAGCTTTTCCCGGCGCAGCCATTACTGGCTTGGTTGATAATGTTGTTAAAGAAACCATATGTCACAATGCTA
CCGACCGATCCACCACTAGAAGGGGTTCCACTGCCTTTACAAGGACCTGACCGACACCCAGCACCGCAGTAAGCATCAGTGGTACC
ACAATAACCGTACTGACTGCAGCATAAGTTTGAGGCGCAGCCGCAGTTCTGAGAGTTGACTGTTTCGGAGTAGAAACCTAAGAGGC
AGAGGAGAAGGACTAGAGAGATTTTTGTGAGAGCCATATTTTGTATTTGTGGATCCC
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GenBank top hits (Blast detail) | Score | e value |
XP_002881917 hypothetical protein ARALYDRAFT_483470 [Arabidopsis lyrata subsp. lyrata] | 1328 | 3e-144 |
NP_181887 chitinase-like protein [Arabidopsis thaliana] | 1323 | 1e-143 |
Q06209 RecName: Full=Basic endochitinase CHB4; Flags: Precursor | 1301 | 4e-141 |
BAF35569 chitinase [Brassica rapa subsp. pekinensis] | 1297 | 1e-140 |
ABV89613 chitinase [Brassica rapa] | 1267 | 3e-137 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q06209 Basic endochitinase CHB4 | 1301 | 2e-142 |
P27054 Endochitinase PR4 | 846 | 1e-089 |
P29023 Endochitinase B (Fragment) | 807 | 3e-085 |
Q7Y1Z0 Chitinase 5 | 774 | 2e-081 |
Q6K8R2 Chitinase 6 | 767 | 1e-080 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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