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Information for unigene UN20171

FASTA Sequence
Unigene ID: UN20171Length: 1089  SNP
CAAAGAACAAATATTATATAAGACAATAAATATCACTCAACACACTTTTTAATCTTAAATTCACTTCCACAAGACGGTACAAAAGA
AAATCACTTTTCACAATTATTACAACAACATTTGCTTGCGAGCAAAGAACATTGAAATTTGAAACACAACGCAAAGTACATACGTG
AAGTATAACTTTACCATCTCACTTAGACACTTATTATTTCACCTTAAACACAAACGTCACATATAATTTGCAACCTTACATGTGTG
TGCATAGAGTTTCTTAGCAGCCAAGGTTAGAACCAGGGTCGACACCAAGCTGTCCACAATAGTTTCTATAGTAACTAATCCTTGCA
TTGACGGCACCCGGGTTCCCACCGTTACACTCCATTCCATTGATAGCTCTAATGGTCGCTCCAAACCCTTGGTTCAGTACCGGTCT
TACGCTATTCATCCAAAACCAGAGACCTGTCCTGAAAGCCACAGTTGGGTTGCTACCCACTAGTTCTGGCTGGCGTAGGAGATTAA
GGCCGAGACTCTGGCCGCATGCTCCGTAATTGTAGTTCCATGATAGCTGGATCGGTCCACGACCGTAGTAGCCTTTACCCGGTGCA
CATGGGTATTGCCTGTTGTTCTCGTCGCAGTAGTCTCGTGACGCTCCGTTTATTTCTTCTATATAGCAGAAGTGTCCTGTCTCGTG
AGTGAAATGAGCAAACATGGTTGCAATTTCACGCCTAGTAACGGAACTAGCAAAGTTTGGGAATGTATTAGCAGCGTTGACGAAAG
AGTCGCGGGTGTAGAAGCTTTTCCCGGCGCAGCCATTACTGGCTTGGTTGATAATGTTGTTAAAGAAACCATATGTCACAATGCTA
CCGACCGATCCACCACTAGAAGGGGTTCCACTGCCTTTACAAGGACCTGACCGACACCCAGCACCGCAGTAAGCATCAGTGGTACC
ACAATAACCGTACTGACTGCAGCATAAGTTTGAGGCGCAGCCGCAGTTCTGAGAGTTGACTGTTTCGGAGTAGAAACCTAAGAGGC
AGAGGAGAAGGACTAGAGAGATTTTTGTGAGAGCCATATTTTGTATTTGTGGATCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002881917 hypothetical protein ARALYDRAFT_483470 [Arabidopsis lyrata subsp. lyrata]13283e-144
NP_181887 chitinase-like protein [Arabidopsis thaliana]13231e-143
Q06209 RecName: Full=Basic endochitinase CHB4; Flags: Precursor13014e-141
BAF35569 chitinase [Brassica rapa subsp. pekinensis]12971e-140
ABV89613 chitinase [Brassica rapa]12673e-137

Swiss-Prot top hits (Blast detail)Scoree value
Q06209 Basic endochitinase CHB413012e-142
P27054 Endochitinase PR48461e-089
P29023 Endochitinase B (Fragment)8073e-085
Q7Y1Z0 Chitinase 57742e-081
Q6K8R2 Chitinase 67671e-080

TrEMBL top hits (Blast detail)Scoree value
O24658 At2g4359013237e-144
B7X6W0 Chitinase13013e-141
Q05K38 Chitinase12978e-141
A8IXF7 Chitinase12672e-137
O24598 At2g4358011652e-125

Arabidopsis top hits (Blast detail)Scoree value
AT2G43590.1 chitinase, putative13298e-147
AT2G43580.1 chitinase, putative11667e-128
AT3G54420.1 ATEP3; chitinase8791e-094
AT2G43620.1 chitinase, putative7965e-085
AT2G43610.1 glycoside hydrolase family 19 protein7922e-084

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  15%
 
104  31%
 
62  15%
 
82  15%
 
113  23%

Unigene MembersMember information