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Information for unigene UN20189

FASTA Sequence
Unigene ID: UN20189Length: 904 SSR 
CCAATAAAATATACTCACACACCTTTTATTGAACTTTAGTCGACACAACAACAACAACAACAACATCAGGTTTCAAAAAAAAACAA
AATCAAAAGATAAAAACATCAACAAAAGAAGTGTAAGTACAATTTATTCTCGAATTACATTAAAAAAGAGTCCCAAACAATTACTG
CCAAGTGTTTGAACGATTCAGCGTTATTGGTTACTTTCATTTACTCTAGTCCTCACGTGCGTGCCAAGTTCGATATTTGTCTTTCA
TCATCATTTAGTGCGAAATGAAAACATTATACTCGACCACGGCATCCAAACCACTAATCGAGTAAGTCTCGGCCTGTGCATAGCCT
CTAGCGAGCCTGAACGCACCGGTACCTCCTATGATCGGAAACTCTCTCACTTTTGAGAATATAGGATTCCGTCCGTACATAGAGAC
GGTGCTGCCGTTAAACTCACCTTCCGTGAACACCAAGTTAAACACCATGGTGAAGCTTAAGGTGTTCATATCCGTCGACGCATACA
TCCCCTGAGCCCTCCCGATTTCCTTGGAACTCCGGTCGGGTCCCTCAGTCAAAGGGTTGTCGGCTATCACAACCACACCAAATGAT
GAGACGGCGGAGGAGTTTACGACGGGGGGCACTGTGACTCTTATGGCGGTGGGTTTGTCACCGGATATGACGTCATGGAAGTAGAA
GCGGAGGTGCGTGAGTTTCTCTGGCTTGTATTCTTGAAACGGAGTCGTTTTGGAGTAAGAGTTGGATTCTGCAGCAGTGACGGCAA
GAAGAAGAATCGTTGAGAAGAGAGGAAGAATAAGCTGAAAACGTTTAGCCATGATTGTTGTTTGTTAGCTACAAAGTCAAGAAATA
CTACATTAGGCTATTGTGTGTAATTGTGTAAATGTGATATTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002863772 disease resistance-responsive family protein [Arabidopsis lyrata subsp. lyrata]7036e-072
NP_199065 disease resistance-responsive, dirigent domain-containing protein [Arabidopsis thaliana]6947e-071
NP_173703 disease resistance-responsive, dirigent domain-containing protein [Arabidopsis thaliana]6453e-065
AAB72169 hypothetical protein [Arabidopsis thaliana]6411e-064
NP_199066 disease resistance-responsive, dirigent domain-containing protein [Arabidopsis thaliana]6373e-064

Swiss-Prot top hits (Blast detail)Scoree value
P13240 Disease resistance response protein 2062194e-017

TrEMBL top hits (Blast detail)Scoree value
Q9FIG7 At5g425006945e-071
Q67YM6 Putative disease resistance response protein6452e-065
O23132 At1g229006417e-065
Q9FIG6 At5g425106372e-064
Q9SS03 F12P19.35531e-054

Arabidopsis top hits (Blast detail)Scoree value
AT5G42500.1 disease resistance-responsive family protein7006e-074
AT1G22900.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: disease resistance-responsive family protein (TAIR:AT5G42500.1); Has 560 Blast hits to 559 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 560; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).6461e-067
AT5G42510.1 disease resistance-responsive family protein6432e-067
AT1G65870.1 disease resistance-responsive family protein5545e-057
AT1G58170.1 disease resistance-responsive protein-related / dirigent protein-related3735e-036

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
114  50%
 
104  50%

Unigene MembersMember information