Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN20194

FASTA Sequence
Unigene ID: UN20194Length: 897  SNP
GGAAGTAAGACAAGTAAAGCACAACAGAATCGCAAACACAACTGTCAAAGAGTTAAAGCTAAGCAACCATTTTCACGCTCTCTTTT
ATATCATATCAATAAATAAATAAAAGCTATTCATCACCCCGAAAGGAAAAGAAAAATATCAAAAGAGAGTTCTCGAATCTGTTTCA
ATGGCGATTAACAACAAGCTTCCTCTTCTCCTTCTCTCTGTCATCATTCTCATCCTCAGTCGCCCTGTGGTCAGTGACACTGATGA
AGAGGACGTTCTTTTCACAGGCATCAACAGCTACAGAACATCACAGAATCTCACAACCTTAAACAAGAACAAAAACGCAGAGTGTC
TAGCCGACGAACTCGCCGATCAATTCAAGAACAAACCATGCACCAACGACACCGGCTCAGCCACAGTGCCTGGAACCGAACCACAG
TTCTCAGATTACCCTAACATTCTAGCTAAATGCCACTTAAACGTCTCAGACACAAGAGACGGCTCTATTATGCCCGCGTGTGTTCC
TCGTCTAGAGTCAAGCCTCGTCCTCACAAACTTCACCAAGTCGCAATACTCCATGAGTTTGAACGATTCCAAGTTTACAGGGATGG
GCATCGGTAAGGAAGATGATTGGATCGTTGTGGTTCTCACCACCAGCACACCTGAAGGAAACTATTCTCCAGCTACAAAACAGGAT
TCCAGTGGCTTCATCTTTAGTATTGGCCTCTTTAATTACTTGCTTGCTTTCACGTTGTCCTTCTGTTTCTTCCTCTGTTGATGAGA
GTGACACCTACCACACATGTCATGAGTTTTTTTTTTGTCTCAAGAATAATTTTTGCTTATGTTATTTACTAAATTTCTTTAAATTT
TTTATACATATTAGAAAGCATCTTAAATTTTAATTAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884553 hypothetical protein ARALYDRAFT_477902 [Arabidopsis lyrata subsp. lyrata]8481e-088
NP_566267 glycoprotein membrane precursor GPI-anchored protein [Arabidopsis thaliana]8292e-086
AAM65942 unknown [Arabidopsis thaliana]8282e-086
NP_197426 GPI-anchored glycoprotein membrane precursor [Arabidopsis thaliana]6257e-063
XP_002871873 hypothetical protein ARALYDRAFT_488808 [Arabidopsis lyrata subsp. lyrata]6184e-062

Swiss-Prot top hits (Blast detail)Scoree value
Q84MC0 Uncharacterized GPI-anchored protein At3g060358297e-088
P59833 Uncharacterized GPI-anchored protein At5g192506253e-064
Q84VZ5 Uncharacterized GPI-anchored protein At5g192404685e-046
Q8GUL8 Uncharacterized GPI-anchored protein At5g192302373e-019

TrEMBL top hits (Blast detail)Scoree value
Q0WSE0 Putative uncharacterized protein At3g060358291e-086
A9PEA9 Putative uncharacterized protein6131e-061
B9HM67 Predicted protein (Fragment)6076e-061
C6TFL8 Putative uncharacterized protein5781e-057
C6SXT3 Putative uncharacterized protein5762e-057

Arabidopsis top hits (Blast detail)Scoree value
AT3G06035.1 unknown protein8296e-089
AT5G19250.1 unknown protein6272e-065
AT5G19240.1 unknown protein4668e-047
AT1G54860.1 unknown protein3824e-037
AT5G19230.1 unknown protein2373e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
83  27%
 
106  55%
 
111  9%
 
121  9%

Unigene MembersMember information