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Information for unigene UN20213
| FASTA Sequence |
| Unigene ID: UN20213 | Length: 833 |
| SNP | GGAGACACGCCAATTTTCGACCAGAGACTCGAAACTTGTGGTGGTTTCTATAGAAGGGGGGATACAAGGAGATTATTAACAAGAGA
GACGCTTTGAAGATAAGAGAGAAGCCCATAAACAAACACAAAAATGCTTCAACTCTGCTCCACTTTCCGTCCTCAACTTCTCTTTT
CTCCCCAAATCCGATTCACAGATGGAGTTTTGATTCGCCAACTAAACTTTGGTTCGAGCAATTCAGTTGTGAGTATCCGTCCAGTG
ATACGTTGCCAGAGAGTTAGTGGAGGTCGAGGAGGAGCTAACCGAAGCAAACCCGCCAAGCCTCCTGTTAAAGAAGGCAGCAACAA
AACAGTGATCGAAGGTTTAGTCACCGAATCGCTTCCCAACGGCATGTTTCGAGTTGATCTTGAGAATGGAGATAACATTCTTGGGT
ACATTTGTGGTAAGATCAGGAAGAATTTCATACGAATTCTCCCTGGTGATAAAGTGAAAGTTGAAATGAGTGTTTATGATTCTACG
AAAGGTCGTATCGTTTTCAGAATGAGTAGTAGAGACTAAGACGAATCCCAAAAGGGGTTGTTTCAAGATCATGTTATATTCTATTT
TTAAGTGTAGGCAAAGTTTGATAAAGCTTTAACATTTATGCAATATGAATACATGATTAGGCTTTCATGGATAAAGCTTTTTTTTA
TGTCCAAGTTGATTCTTGTTTTGATACTAGTGTTGTTCTGCGGTTTGATAACCAGACGAAGTTGCTAAAACCCTTTATTGAGAACG
ACTGTATGTAAAATTATAGCTTTGTCTTCTGTCCTTTGAGCTAAGCTCATTTCATATTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002872555 hypothetical protein ARALYDRAFT_327268 [Arabidopsis lyrata subsp. lyrata] | 659 | 7e-067 |
| NP_192856 translation initiation factor IF-1 [Arabidopsis thaliana] | 648 | 1e-065 |
| CAB43052 RPP1-WsA-like disease resistance protein [Arabidopsis thaliana] | 547 | 7e-054 |
| AAC35543 similar to translation initiation factor IF-1 [Arabidopsis thaliana] | 494 | 9e-048 |
| Q94KR7 RecName: Full=Translation initiation factor IF-1, chloroplastic; Flags: Precursor | 268 | 1e-021 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O82499 Translation initiation factor IF-1, chloroplastic | 648 | 6e-067 |
| Q94KR7 Translation initiation factor IF-1, chloroplastic | 268 | 7e-023 |
| P69041 Translation initiation factor IF-1, chloroplastic | 261 | 4e-022 |
| P69042 Translation initiation factor IF-1, chloroplastic | 261 | 4e-022 |
| Q09G11 Translation initiation factor IF-1, chloroplastic | 261 | 4e-022 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| D3WBN5 Translational initiation factor 1 protein | 267 | 1e-021 |
| Q95GN6 Translation initiation factor IF1 | 263 | 4e-021 |
| D3WCC2 Translational initiation factor 1 protein | 262 | 5e-021 |
| D3WAJ1 Translational initiation factor 1 protein | 261 | 7e-021 |
| C4P351 Initiation factor IF1 | 260 | 9e-021 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT4G11175.1 translation initiation factor IF-1, chloroplast, putative | 649 | 4e-068 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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