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Information for unigene UN20230
| FASTA Sequence |
| Unigene ID: UN20230 | Length: 2127 |
| SNP | GACTTCATGCCGCCTCAGGGAGGGTTCTTCATCGGCAATGTTAGCCCAGCAAGAATGGATTTCCGTTGGTTTGCTCTTGGCAATTG
TATAGCGATACTGTCTTCCTTGGCTACTCCTGAGCAGTCGACCGCAATTATGGATTTCATAGAAGCTCGCTGGGAAGAGCTGGTCG
GAGAAATGCCGCTCAAAGTTTGCTACCCTGCAATAGAAAGCCATGAATGGAAGATAGTGACTGGATGTGACCCCAAAAACACTCGA
TGGAGCTACCACAATGGAGGGTCCTGGCCAGTGTTGCTTTGGCTACTGACGGCTGCTTGTATCAAAACGGGTCGACCTCAAATAGC
AAGACGAGCGATTGAAGTGGCGGAAGCTAGGCTTCATAAAGACAACTGGCCTGAATACTATGATGGAACGGTAGGGAGATACGTCG
GGAAACAAGCGCGTAAATGCCAGACCTGGTCAATTGCTGGATACTTAGTGGCCAAGATGATGCTGGAAGATCCGTCACATGTCGGT
ATGGTTGCTCTCGAGGAAGATAAACAAATGAAACCTGTTATGAGAAGATCCAACTCATGGACTTGTTGAAAAGTTTGATCATTTTG
GTCAAAGGTAACGTAGGGAAAAAATGAGCTAATGCTGATAATCGAATCTTTCTTTGTTTTTCGAATTCCACATTTTAAATTGTTTT
TGCTTTGTGAAATATTTTTAGACTATGAGAGATTTAAGCATCATAAAAAGATTTCATCTGGTTTAGCTTCCAAGTCTTATTATTAT
ATGATTTTCTCTCTGGTGTAATGACTGTATAACAGAAGACTATTTTTTCTTGAGCCCTTAGTTATCACCAAACCCCATTTCTTGAG
CTTCAAGGTAATACCAAAACCTCCATTACTTTTTCGCTCAAACGTCAAGGTTTCGAGCAACGATGCCTTCAAATGTAACACCAGGT
CCAAAAGCAAGAATCAGACCCCACTCGTTTCCACCTTCATTCATGTTCCTGGCTTTCCTGCTCTCCTCCAACATATACTCCAACAC
ATAAACGATCGAGTTGCTACTTGCGTTGCCATAGTCCATTAGAGCTCTCCTGCTTGGACTCAGCTTCTCAGGCGACAGGTTAAGCC
GCTTTTCCATTCGGTTCAAGATGGCGGGTCCACCTGGATGAACCGCCCAGAACATTTGGTTATAGTCTTTATTAGCCAGTCCTGCT
TTTCCTATTAGCTTCTTGCAGAAACTCTCCACGTTGTCTTCTATTATCTGTGGAAGCTCTCTAGACAGCGTGAAGTTTATCCCTTG
TTCCGTTAGCTTCCCATCTATCGTCTTCTCCGTGTCAGGAAGGAAGTTCTGAATTGCTGTGTGGAGCTCAAAGAGAGGCTTCTCAT
GAATCGGGTCTGGATCGGATCCGATGATCATAGCTCCGGCTCCATCACCAAACAATGCGACCCCAACAAGATCATACGGTCTATCA
GCACTCGGAGGTTTGAACCCAATGATGGTCGTCTCAGAGGTGGCGAGCAAGACTCTACTCCCCGGATTGTTCTCGGCTATGTCTTT
CGCTACACGGAGACCGGCAACGCCACCAGAGCATCCCACGAAGTAGAGCAGGACACGGTGTGTCTCGGGGCTTAGACCAAGGCCTT
TGGCTAAGTAGAGGTCGCCACCAGGGAGACGAGCTTCGCTTGAAGAGACATAGACAAGGTGAGTTATGTCGGAAATAGAACGGCCC
CAGTTCTTGATGCAGACTCTAGAAGCCTCCACTGCCATTTCGGTTACAGCGTCGTTGCATATGTCTAGACGCTGCTTCACGGTGGA
TCCTCCTTCAATGGCTAGTTCTGGATACTTTGTTAGTATCTCCTCTGACATGACAACATACCTTGTCCTCACAGTCGTTGTCTTGC
AGAGACGAGTAAGCTTCTGTTTGAGTTCAGGGTCATCACAATTAGTAGTTTTAAAGTAGCCATCAACCAAGTATTCTTGCATTACT
AGCTGCTGAGGAAAGGCTTTTCCAATTGCAAGAATTGTAGCCTTCCCCGGATTTGGTTTCTTCTCTAAACCCAACTCTGTTGCATC
GATGCTTCCCATTGCTCTCTCTCTTTTAATTGTTAAGACTTGAGATCCAAATCTTGGGTCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ADF43047 chalcone synthase 6 protein [Brassica rapa subsp. rapa] | 1948 | 9e-216 |
| AAZ23705 chalcone synthase family protein [Arabidopsis thaliana] | 1899 | 4e-210 |
| AAZ23686 chalcone synthase family protein [Arabidopsis halleri subsp. gemmifera] | 1895 | 1e-209 |
| NP_567971 Chalcone and stilbene synthase family protein [Arabidopsis thaliana] | 1893 | 2e-209 |
| ABK28665 unknown [Arabidopsis thaliana] | 1893 | 2e-209 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O22047 Chalcone synthase E | 784 | 3e-082 |
| O22046 Chalcone synthase E | 775 | 4e-081 |
| Q9FUB7 Chalcone synthase | 774 | 5e-081 |
| P08894 Chalcone synthase A | 769 | 2e-080 |
| Q43188 Chalcone synthase 2 | 766 | 4e-080 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| D5LQ20 Chalcone synthase 6 protein | 1948 | 6e-216 |
| Q460V0 Chalcone synthase family protein | 1899 | 3e-210 |
| Q460X2 Chalcone synthase family protein | 1895 | 9e-210 |
| A0MFB8 Putative uncharacterized protein (Fragment) | 1893 | 1e-209 |
| Q8LDM2 Chalcone and stilbene synthase family protein | 1893 | 1e-209 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G34850.1 chalcone and stilbene synthase family protein | 1894 | 6e-212 |
| AT1G02050.1 chalcone and stilbene synthase family protein | 1303 | 2e-143 |
| AT4G00040.1 chalcone and stilbene synthase family protein | 1249 | 4e-137 |
| AT4G34860.1 beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative | 1019 | 2e-110 |
| AT4G34860.2 beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative | 1019 | 2e-110 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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