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Information for unigene UN20231

FASTA Sequence
Unigene ID: UN20231Length: 1182  SNP
GGAATCATTCACTTTCCTTTATGCTACAATATTATACAATAGCTCTTCTCTATAGTTATATAACTTCTCACCATTATCAAAACCTT
TCATTGTTGCATTCGTCGATCAAAACAAAGATTGAAAAATGAGGACCAAATCTCAGTCTTCTGTTAATCTGAAGGTCATATTCACA
TGCTGCTCAATCTTGATCTTTCTCATTATCTTCTTTGCAAGATCAAACATCTCTTCTTCCTCCTCAAGGCCCCTTTCCAAAACACA
TCTCTCTCAAGAAGAAGAAGAAAATCAGACGCATTGTCCATCAACAAAACAATGCACAAAGATGCCAATATCTTTATCCGACGCAT
TGGTTCACTACGTCACCAGTAACGTCACTCCACAACAGACATTCGACGAAGTCTCTGTCTCAAAGAGAGTGTTGGACAAGAAGTCT
CCATGTAACTTCCTCGTCTTTGGTTTAGGTCATGACAGCTTGATGTGGGCATCTCTCAACCACGGTGGACGTACCTTGTTTATTGA
GGAAGATAAGGCTTGGATCGAGACTGTGACTAAGAAGTTCCCAAACTTGGAAGCTTACCACGTCGTTTACGACACCAAAGTGAAAA
ATTCAGACAAGCTGATGGAGCTAGGAAGATCAGAGGAGTGCAAATCCGTCTCCGACCCAAGAAACTCGAAATGTGATCTAGCGTTG
AAAGATTTTCCGGCAGATTTTTACGAGACGAAATGGGATCTGATCATGGTAGATGCTCCAACTGGTTACCACGAGGAAGCTCCAGG
GAGGATGAGCGCTATCTACACGGCGGGGCTTTTGGCTCGCAACCGTGAAGATGGAGAAACTGACGTTTTTGTTCACGACGTTAACC
GTCCGGTGGAAGATGAGTTCTCGGCGACTTTCTTGTGTAAGGGATACATGAGGGAGCAAAATGGGAGGCTAAGGCATTTCACCATC
CCTAGTCACAGGGCTCGAGCTGGAAGACCGTTTTGTCCTGTGGATGTTGATCGCCGCCGCCGTTGATTTACATGGTGGACCTAGAG
TCACTTTGCTTAGCTGGCTTTCTGTGTGTGTTTTTGCTTTATCTTTGATGATTTTGGTTTACTTTTAAGGATTCAGTGCATTTACT
GAAACGATGTATTAATGTAGTTTTCTTTTCTTCATATAATTATTTGTCATATTAATGAACACAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564428 uncharacterized protein [Arabidopsis thaliana]14134e-154
XP_002891062 predicted protein [Arabidopsis lyrata subsp. lyrata]14118e-154
NP_192737 uncharacterized protein [Arabidopsis thaliana]11662e-125
XP_002874599 hypothetical protein ARALYDRAFT_489845 [Arabidopsis lyrata subsp. lyrata]11303e-121
ABK93991 unknown [Populus trichocarpa]9654e-102

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LQ32 At1g33800/F14M2_2314133e-154
Q9T0F7 At4g0999011661e-125
A9PC88 Putative uncharacterized protein9653e-102
B9SK84 Putative uncharacterized protein9644e-102
B9MWH1 Predicted protein (Fragment)9511e-100

Arabidopsis top hits (Blast detail)Scoree value
AT1G33800.1 unknown protein14132e-156
AT4G09990.1 unknown protein11855e-130
AT1G09610.1 unknown protein8593e-092
AT1G71690.1 unknown protein8361e-089
AT1G67330.1 unknown protein5914e-061

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  11%
 
96  32%
 
105  26%
 
64  21%
 
112  11%

Unigene MembersMember information