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Information for unigene UN20232
| FASTA Sequence |
| Unigene ID: UN20232 | Length: 1161 |
SSR | SNP | GGATAAGACTCCCAAAAGAAAAGGAGAAAAGGATGTAATTAAATTCAGCTTTTACATTTAAACAAACATCTAATGTGTTGATAATG
CAAAAGCAATTCATATATGGAAAAAAATTGCAACAAAAAGCTATGGGGTAATCGCTCTTTCTAGCAAACAACATGCAAACTAACCT
GATAATTGTTAGTTTCATTTAATAGGATTATATGTATCAAGCTTTTTGTTCATATGAGTTTGCATCCACAGGAATTCCAGGACCAT
ACACAAGTCGGCATCGGTCACTAAACGCCCCAATGAGCCTTGTTGCTACCTCCTTTAAGAACATCGAAGCCACCTGGCGATAAAGA
GGTGAGTTGAATTTGAAATCGACAAGAATAGAAAGCTCGCAGGTTCCTGGAATGGGACCTGGCTTGAACTGCCAGAGGTTGATCAA
ATGGTCAAACAGGCCGGTGTCTCTCGCTGTCGTCTTAATCCATTTGGGTCTTTCGAACTCAACATGGGAGATGTAACTCTCAACAA
GAAACTTGAAACCAATCTCGAGCTCAGCGTCGAAAGAGCCATCAGAGTATTCTTTAAGAACCTCGGAGCGTTGACACCAAGGAACA
AAGCCGTGGTACAAGTCTACAGCTAGAACTACATTAAACAATTGCTCCTGAGAATACCCCAAGACACGTCGCTCTTCATAGATCTT
TGATAATTCACCACCACCTTCTTCCCCATCTCCACAACCCAGAAAATGCCGTCTTTGAATTAAGCTCCCAGTACCGAAAGCGACTC
TTCTACCATCATTATCGGACATCAACCCGTGAGAAGAGCATCTATCTACCCCCGAAAGAGAACCAAATCGGCGAAATCGATTCCAT
TTAAAACTGCTCTGAACGATCCCGGAGCGATTAATCGGGCTCCTGATTGCGTTTCGACATGAAATTAAGCTGAACAAAGCTCTCGA
GCCAGACATAAACGGTCGCATTATTACCGAAAACAAACGTGTCGGAGAGAGAGTTTAGGGTTGCAAACAGAGACGACGAAAGGCCA
AATCTTTTTGATTCGATTAGCTACCGTTGAGAAAGAAAAAAACCAACCAATAGACCCCTCTTCTTCACCAAGCAATGGAGAGAGAG
AGAGAGAGACGTAATCTACAGCGCTATATGCTCGCAGCAACCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002870092 hypothetical protein ARALYDRAFT_493112 [Arabidopsis lyrata subsp. lyrata] | 1075 | 7e-115 |
| NP_193500 Polyketide cyclase / dehydrase and lipid transport protein [Arabidopsis thaliana] | 1063 | 2e-113 |
| AAM65497 unknown [Arabidopsis thaliana] | 1063 | 2e-113 |
| AAK44160 unknown protein [Arabidopsis thaliana] | 973 | 5e-103 |
| XP_002301184 predicted protein [Populus trichocarpa] | 769 | 2e-079 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q6DFA6 Coenzyme Q-binding protein COQ10 homolog A, mitochondrial | 306 | 4e-027 |
| Q9H8M1 Coenzyme Q-binding protein COQ10 homolog B, mitochondrial | 304 | 7e-027 |
| Q5RD79 Coenzyme Q-binding protein COQ10 homolog B, mitochondrial | 304 | 7e-027 |
| Q567E6 Coenzyme Q-binding protein COQ10 homolog B, mitochondrial | 299 | 3e-026 |
| Q3THF9 Coenzyme Q-binding protein COQ10 homolog B, mitochondrial | 299 | 3e-026 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LAA4 Putative uncharacterized protein | 1063 | 1e-113 |
| Q94K29 Putative uncharacterized protein At4g17650 (Fragment) | 973 | 3e-103 |
| B9GNW0 Predicted protein | 769 | 1e-079 |
| B9R7C0 Protein COQ10 B, mitochondrial, putative | 759 | 2e-078 |
| Q00M76 Aromatic-rich family protein | 714 | 3e-073 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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