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Information for unigene UN20239
FASTA Sequence |
Unigene ID: UN20239 | Length: 1256 |
| SNP | GGGACCCCCTCCAAACCATTACAATAAAATTTATAATTAGCCATGGAGAAGAAGACTAACCAAACCATCTTCTCCATATTTACTCT
TCTTCTTCTTTTTGCTTCAAGTGTCTCTGCTCAGCTTCGGACAGGTTTCTACCAGAACTCATGCCCGAACGTAGAAAGCATTGTCC
GTAACGCCGTCCGTCAAAAATTCCAGCAGACTTTTGTCACTGCTCCAGCCACCCTCCGCCTCTTCTTCCACGATTGCTTCGTTCGT
GGATGTGATGCTTCGATAATGATAGCATCTCCATCGGAGAGAGACCATCCGGATGACATGTCATTGGCCGGAGACGGATTTGACAC
AGTGGTGAAGGCGAAGCAGGCCGTTGATAGAGATCCTAGATGCCGCAACAAAGTCTCATGTGCTGACATTTTGGCTCTCGCTACTC
GTGAAGTCGTCGTTTTGACCGGAGGACCTAGCTACCCGGTGGAGCTAGGGAGGAGAGATGGCAGATTATCTACGAAGGCAAGCGTT
CAAAATAATTTGCCACAGCCCGGGTTTAACCTAAACCAGCTCAATGCCATGTTCAACCGTCACGGTCTCTCTCAAACCGACATGAT
CGCCCTCTCAGGAGCGCACACTCTCGGATTCGCACATTGCGGAAAATTCTCGAACCGAATTTACAATTTTAGCCCTAGAACCCGTA
TCGACCCGAGTTTGAACAGTGGCTACGCGCTTCAGCTTCGCCAGATGTGCCCGCAACGTGTGGACCCACGTATCGCGATCAACATG
GATCCGACCTCGCCACGTACTTTCGACAACGCTTACTTCAAGAACCTTCAACAAGGAAAGGGTCTTTTCACGTCTGATCAAGTATT
GTTCACAGACCAACGGTCTAGAGCTACGGTTAACTCGTTTGCCAACAGTGAAACAGCTTTTAGACAAGCTTTTATTTCAGCCATCA
CGAAGTTGGGTCGTGTTGGGGTTATGACTGGTAATGCTGGTGAGATTCGAAGGGATTGTTCACGTGTCAATTAGTTTGATTTGATG
GGTTTGTTTCTTTTTTTTCCTTAAGAAGATTTCATATTTTTCTTCTTAATAATAAAATCGTATTGTTTTTTAATAATATTTCAAAA
GTATCGGAAATGGGAACGTGGATCAATAATAAGATGGCTTCATATCGTTTCTCTTCTCTTTTTTTTTTTGATAAGTTTCTCTTCTC
CTTTTGACTTAAGCTTGTAGTGATGCTATTATGGTTTTTTAATGAGACAATA
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GenBank top hits (Blast detail) | Score | e value |
NP_194746 peroxidase 45 [Arabidopsis thaliana] | 1514 | 1e-165 |
XP_002869392 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1513 | 1e-165 |
NP_179488 peroxidase 16 [Arabidopsis thaliana] | 1404 | 5e-153 |
CAA70034 peroxidase ATP22a [Arabidopsis thaliana] | 1404 | 5e-153 |
XP_002884180 hypothetical protein ARALYDRAFT_900345 [Arabidopsis lyrata subsp. lyrata] | 1390 | 2e-151 |
TrEMBL top hits (Blast detail) | Score | e value |
Q0WTC2 Peroxidase | 1404 | 4e-153 |
D4NYQ9 Peroxidase | 1302 | 2e-141 |
C6TJS4 Putative uncharacterized protein | 1267 | 3e-137 |
B9ILW4 Predicted protein | 1264 | 6e-137 |
B9T3I4 Peroxidase 16, putative | 1226 | 2e-132 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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