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Information for unigene UN20242

FASTA Sequence
Unigene ID: UN20242Length: 1043  SNP
GGGTGATAGATGCGATAGAGAACGAAAAAGTTGTTGAAAAGACCGTCAAGATATGCAACATAGACCGTGCAGCATGTGGACGCGTT
GCTGGGGTCATCGCAAAGAAGTATGGAGACACTGGTTTTGCCGGACAAGTGAACCTAACCTTCCTTGGGAGTGCAGGACAGTCCTT
CGGGTGCTTCTTGATTCCCGGTATGAATATCAAACTCATTGGAGAGTCCAATGATTACGTAGGAAAGGGAATGGCTGGTGGTGAGA
TAGTAGTAACTCCTGTGGATAAAATAGGGTTTGTGCCAGAGGAAGCAACCATAGTTGGGAACACTTGCTTGTACGGTGCAACGGGT
GGTCAGATATTCGCTAGAGGCAAAGCTGGGGAGAGGTTTGCGGTTAGAAACTCACTCGCTGAAGCAGTAGTTGAAGGCACTGGTGA
TCATTGCTGTGAGTACATGACTGGTGGTTGTGTCGTTGTGCTTGGAAAAGTGGGGAGAAACGTCGCTGCAGGTATGACAGGAGGGT
TAGCTTATCTTCTTGATGAAGACGACACTCTTCTTCCCAAGATTAACCGAGAGATAGTGAAGATCCAGAGAGTAACTGCACCTGCA
GGGGAATTGCAGCTCAAGAGCTTAATCGAAGCCCATGTGGAAAAAACCGGAAGCAGCAAAGGAGAGACGATCTTGAAGGAATGGGA
AAAGTATCTACCTCTCTTCTGGCAACTGGTTCCACCGAGCGAGGAAGACACTCCTGAGGCTTCTGCTGCTTATGTAAGAACAGCCA
CCGGTGAAGTCACATTTCAATCGGCATAGAGGAGATGTTGCAGTCGAAACAGAAGGATTGATACATCAATGGTGGGCTACGGAGGG
AAAATAGATCATTCACAGATCAATGTGTGTGACAATATTCTTATTGTCCTGTGATCTTAACAGTACCATGATTGCTATAAGATGTA
CAGTTATTCAGTTAAATAACTGCATTCAACTGCCATGAAGATTCCATAAAATTTGCAATATTATCTTTCATTGAATAAAGTTTGTA
GTATTTTAAAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_850763 ferredoxin-dependent glutamate synthase 1 [Arabidopsis thaliana]13491e-146
NP_568134 ferredoxin-dependent glutamate synthase 1 [Arabidopsis thaliana]13491e-146
BAE98673 ferredoxin-dependent glutamate synthase [Arabidopsis thaliana]13491e-146
AAC78551 ferredoxin-dependent glutamate synthase precursor [Arabidopsis thaliana]13453e-146
XP_002871077 ferredoxin-dependent glutamate synthase 1 [Arabidopsis lyrata subsp. lyrata]13372e-145

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZNZ7 Ferredoxin-dependent glutamate synthase 1, chloroplastic13494e-148
Q43155 Ferredoxin-dependent glutamate synthase, chloroplastic11765e-128
Q69RJ0 Ferredoxin-dependent glutamate synthase, chloroplastic11433e-124
P23225 Ferredoxin-dependent glutamate synthase, chloroplastic11416e-124
Q9T0P4 Ferredoxin-dependent glutamate synthase 2, chloroplastic11245e-122

TrEMBL top hits (Blast detail)Scoree value
Q0WW25 Ferredoxin-dependent glutamate synthase13497e-147
Q540F4 Ferredoxin-dependent glutamate synthase13362e-145
B9H8U4 Predicted protein12036e-130
Q2HW53 Ferredoxin-dependent glutamate synthase; Glutamate synthase, large subunit region 1 and 3, putative; Glutamate synthase, eukaryotic11973e-129
B9IHR5 Predicted protein11741e-126

Arabidopsis top hits (Blast detail)Scoree value
AT5G04140.1 GLU1 (GLUTAMATE SYNTHASE 1); glutamate synthase (ferredoxin)13503e-149
AT5G04140.2 GLU1 (GLUTAMATE SYNTHASE 1); glutamate synthase (ferredoxin)13503e-149
AT2G41220.1 GLU2 (GLUTAMATE SYNTHASE 2); glutamate synthase (ferredoxin)11245e-123
AT5G53460.1 GLT1; glutamate synthase (NADH)5511e-056

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
104  24%
 
62  12%
 
123  18%
 
117  41%
 
91  6%

Unigene MembersMember information