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Information for unigene UN20242
| FASTA Sequence |
| Unigene ID: UN20242 | Length: 1043 |
| SNP | GGGTGATAGATGCGATAGAGAACGAAAAAGTTGTTGAAAAGACCGTCAAGATATGCAACATAGACCGTGCAGCATGTGGACGCGTT
GCTGGGGTCATCGCAAAGAAGTATGGAGACACTGGTTTTGCCGGACAAGTGAACCTAACCTTCCTTGGGAGTGCAGGACAGTCCTT
CGGGTGCTTCTTGATTCCCGGTATGAATATCAAACTCATTGGAGAGTCCAATGATTACGTAGGAAAGGGAATGGCTGGTGGTGAGA
TAGTAGTAACTCCTGTGGATAAAATAGGGTTTGTGCCAGAGGAAGCAACCATAGTTGGGAACACTTGCTTGTACGGTGCAACGGGT
GGTCAGATATTCGCTAGAGGCAAAGCTGGGGAGAGGTTTGCGGTTAGAAACTCACTCGCTGAAGCAGTAGTTGAAGGCACTGGTGA
TCATTGCTGTGAGTACATGACTGGTGGTTGTGTCGTTGTGCTTGGAAAAGTGGGGAGAAACGTCGCTGCAGGTATGACAGGAGGGT
TAGCTTATCTTCTTGATGAAGACGACACTCTTCTTCCCAAGATTAACCGAGAGATAGTGAAGATCCAGAGAGTAACTGCACCTGCA
GGGGAATTGCAGCTCAAGAGCTTAATCGAAGCCCATGTGGAAAAAACCGGAAGCAGCAAAGGAGAGACGATCTTGAAGGAATGGGA
AAAGTATCTACCTCTCTTCTGGCAACTGGTTCCACCGAGCGAGGAAGACACTCCTGAGGCTTCTGCTGCTTATGTAAGAACAGCCA
CCGGTGAAGTCACATTTCAATCGGCATAGAGGAGATGTTGCAGTCGAAACAGAAGGATTGATACATCAATGGTGGGCTACGGAGGG
AAAATAGATCATTCACAGATCAATGTGTGTGACAATATTCTTATTGTCCTGTGATCTTAACAGTACCATGATTGCTATAAGATGTA
CAGTTATTCAGTTAAATAACTGCATTCAACTGCCATGAAGATTCCATAAAATTTGCAATATTATCTTTCATTGAATAAAGTTTGTA
GTATTTTAAAT
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_850763 ferredoxin-dependent glutamate synthase 1 [Arabidopsis thaliana] | 1349 | 1e-146 |
| NP_568134 ferredoxin-dependent glutamate synthase 1 [Arabidopsis thaliana] | 1349 | 1e-146 |
| BAE98673 ferredoxin-dependent glutamate synthase [Arabidopsis thaliana] | 1349 | 1e-146 |
| AAC78551 ferredoxin-dependent glutamate synthase precursor [Arabidopsis thaliana] | 1345 | 3e-146 |
| XP_002871077 ferredoxin-dependent glutamate synthase 1 [Arabidopsis lyrata subsp. lyrata] | 1337 | 2e-145 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| Q9ZNZ7 Ferredoxin-dependent glutamate synthase 1, chloroplastic | 1349 | 4e-148 |
| Q43155 Ferredoxin-dependent glutamate synthase, chloroplastic | 1176 | 5e-128 |
| Q69RJ0 Ferredoxin-dependent glutamate synthase, chloroplastic | 1143 | 3e-124 |
| P23225 Ferredoxin-dependent glutamate synthase, chloroplastic | 1141 | 6e-124 |
| Q9T0P4 Ferredoxin-dependent glutamate synthase 2, chloroplastic | 1124 | 5e-122 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WW25 Ferredoxin-dependent glutamate synthase | 1349 | 7e-147 |
| Q540F4 Ferredoxin-dependent glutamate synthase | 1336 | 2e-145 |
| B9H8U4 Predicted protein | 1203 | 6e-130 |
| Q2HW53 Ferredoxin-dependent glutamate synthase; Glutamate synthase, large subunit region 1 and 3, putative; Glutamate synthase, eukaryotic | 1197 | 3e-129 |
| B9IHR5 Predicted protein | 1174 | 1e-126 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT5G04140.1 GLU1 (GLUTAMATE SYNTHASE 1); glutamate synthase (ferredoxin) | 1350 | 3e-149 |
| AT5G04140.2 GLU1 (GLUTAMATE SYNTHASE 1); glutamate synthase (ferredoxin) | 1350 | 3e-149 |
| AT2G41220.1 GLU2 (GLUTAMATE SYNTHASE 2); glutamate synthase (ferredoxin) | 1124 | 5e-123 |
| AT5G53460.1 GLT1; glutamate synthase (NADH) | 551 | 1e-056 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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