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Information for unigene UN20246
| FASTA Sequence |
| Unigene ID: UN20246 | Length: 477 |
| SNP | GGAGGTTTTCTAGCAGAATCGATTTCGCCTAAGCTCCCGCCGCCTCCTTCTTCAGAATGGATTCTCAAATCAAGCACGCCGTGGTC
GTTAAGGTCATGGGGAGAACTGGTTCTCGTGGTCAGGTGACTCAGGTTAGAGTCAAGTTCACTGATTCGGACCGTTTTATCATGAG
GAATGTGAAAGGACCGGTGAGAGAAGGAGACATCCTAACTCTTCTCGAGTCCGAGAGAGAAGCCAGAAGACTCCGTTGATTCCATA
TGCCCATTTCTCTCTGAAAGTGTTACCAATATTTACATTTTGATGATGCCCTCTTATGTTTATTGACCTTATGGTTGTTTTTTTTT
TTGTCTAAGAAATACTCTGTTTTAATTACTCGAGTTTGCTAAGACAATGTTTGGATCTAGAAATGAATCTTTTTCAAATACATGAA
ACTGTGGCAACATTTATCTTCTATCAGTATATGATCACTGTTTATTC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_201219 40S ribosomal protein S28-2 [Arabidopsis thaliana] | 314 | 1e-027 |
| NP_187620 40S ribosomal protein S28-1 [Arabidopsis thaliana] | 312 | 2e-027 |
| XP_002311925 predicted protein [Populus trichocarpa] | 287 | 2e-024 |
| XP_002520788 ribosomal protein S28, putative [Ricinus communis] | 287 | 2e-024 |
| XP_002322747 predicted protein [Populus trichocarpa] | 283 | 5e-024 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P34789 40S ribosomal protein S28-2 | 314 | 1e-028 |
| Q9SR73 40S ribosomal protein S28-1 | 312 | 2e-028 |
| P46302 40S ribosomal protein S28 | 259 | 2e-022 |
| Q6PBK3 40S ribosomal protein S28 | 221 | 6e-018 |
| Q90YP3 40S ribosomal protein S28 | 221 | 6e-018 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| A9P8N1 Predicted protein | 287 | 1e-024 |
| B9S469 Ribosomal protein S28, putative | 287 | 1e-024 |
| A9P8H3 Predicted protein | 283 | 3e-024 |
| Q9ZNS5 Ribosomal protein S28 | 281 | 5e-024 |
| Q9ZRW5 Ribosomal protein S28 | 281 | 5e-024 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT5G64140.1 RPS28 (RIBOSOMAL PROTEIN S28); structural constituent of ribosome | 315 | 8e-030 |
| AT3G10090.1 40S ribosomal protein S28 (RPS28A) | 313 | 1e-029 |
| AT5G03850.1 40S ribosomal protein S28 (RPS28B) | 313 | 1e-029 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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