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Information for unigene UN20248
| FASTA Sequence |
| Unigene ID: UN20248 | Length: 1052 |
| SNP | GGGGACAAGAGTTGGAATCAAACCGTCTCCTGTTGTAGCAGCATTCTCTTCGAGAGGACCCAACTTTCTCTCCCTGGAGATCTTGA
AACCGGACTTGCTAGCTCCGGGAGTGAACATTCTCGCGGCTTGGTCTGGAGACATGGCGCCATCGAGTCTGTCGTCTGACAAAAGG
AGGGTTAAGTTCAATATACTGTCGGGAACTTCCATGTCGTGTCCTCACGTGAGCGGTGTGGCTGCTTTGATCAGATCAAGGCATCC
GGATTGGAGTCCCGCAGCGGTGAAATCAGCTCTCATGACGACGGCTTACGTTCACGACAACATGCTGAAGCCTCTTACGGATGCAG
CGGGAGAAGAACCTTCGTCGCCTTATGATCACGGTGCTGGACATATAGATCCTTTGAAAGCTATAGATCCTGGTCTTGTCTACGAC
ATTGGACCTCAGGAGTATTTTGATTTCCTCTGCACTCAAGAGTTGAGTCCTTCGCAGCTCAAGGTCTTCACAAAGCATTCGAACAG
ATCTTGCAAACACAGTCTTGCCGGTAATAACCCTGGAAACTTGAACTACCCTGCGATTTCAGCTTTGTTCCCAGAGAACACACGTG
TTAAAGCTATGACACTTAGAAGAACCGTGACCAATGTTGGTCCTCACGTTTCAAGCTACAAGGTCTCTGTCTCTCCTTTCAAAGGC
GCAACCGTCACAGTCCAGCCAAAGACACTCAATTTCACTACGAAACACCAGAAGCTTTCCTACAGTGTTACTTTCAGGACGAAGCT
GCGGATGAAGAGGCCTGAGTTTGGTGGTCTTTTATGGAAGAGTGCGACGCATAAGGTTCGTAGCCCGGTTATAATCACATGGTTGC
CTCCTCTGTAGAGAGGACAAACCGTTATTGAAGAAACTCTAATGTTTTAGTTTCAACAAATAAGATTTCTTTATGTAAGGAGGGAG
AGATGAGCTCTTCTCTAGAAGCAATGCTTTAAAAAACATTTTCAGTAGTTTTTAGTTCATGTTCTTGCAGAAGCTACCTTTTAAAA
TAAAATACCGTGTTTTCACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002864127 subtilase family protein [Arabidopsis lyrata subsp. lyrata] | 1410 | 8e-154 |
| NP_568765 subtilase 1.3 [Arabidopsis thaliana] | 1401 | 9e-153 |
| XP_002321861 predicted protein [Populus trichocarpa] | 1155 | 3e-124 |
| XP_002318860 predicted protein [Populus trichocarpa] | 1125 | 9e-121 |
| CAA67430 SBT2 [Solanum lycopersicum] | 1123 | 2e-120 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O65351 Subtilisin-like protease | 669 | 3e-069 |
| Q9LLL8 Xylem serine proteinase 1 | 538 | 5e-054 |
| Q39547 Cucumisin | 275 | 1e-023 |
| P29141 Minor extracellular protease vpr | 158 | 6e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FLI4 Putative subtilisin serine protease | 1401 | 6e-153 |
| B9ICZ0 Predicted protein | 1155 | 2e-124 |
| B9I4H9 Predicted protein | 1125 | 6e-121 |
| P93205 SBT2 protein | 1123 | 1e-120 |
| B9R9K9 Cucumisin, putative | 1093 | 3e-117 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G51750.1 ATSBT1.3 (ARABIDOPSIS THALIANA SUBTILASE 1.3); identical protein binding / serine-type endopeptidase | 1406 | 1e-155 |
| AT2G05920.1 subtilase family protein | 730 | 2e-077 |
| AT3G14240.1 subtilase family protein | 705 | 2e-074 |
| AT4G34980.1 SLP2; serine-type peptidase | 691 | 8e-073 |
| AT5G67360.1 ARA12; serine-type endopeptidase | 670 | 2e-070 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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