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Information for unigene UN20249
| FASTA Sequence |
| Unigene ID: UN20249 | Length: 1210 |
SSR | SNP | GGGGAGCTAGTAATAATAATAATAATAAAGATGGTTTAATTATAGTAATCAAATCATCCTTGTGCCAAATTCAACACACCAAAAAA
TCATTTATTCATGGAGTCCTCTCAATGAATGTTACCAAATTGTCTGCTCGCTTTATTCTTCACAAGAAGCACAATCTTGTTTCAGT
TTTTGTTTTTTTTTTCAAAACACTCCTCCCTCTGTAATAAACATAGATGCCAAAACTCTCATGCACATGTTTAAATGGTTACATTC
ATGGAGAGAGAAAAATGAGATACTTCACACATCGGCAAGTGCAATAAGCTGATCAACAACACTAGGATCTGCGAGTGTGCTAATAT
CTCCAAGCTCTTCTAATTGCCTTGAAGCGATCTTTCTCAGGATTCTCCTCATTATCTTTCCACTTCTTGTCTTTGGCAACCCTGGT
GCCCAATGTATTCTGTCCGGTGCTGCAAATGCCCCAATCTGGTTTCGAACCATGATTATAAGGCTTTTCCGAAGCTCTTCGCTGTA
AGGAACACCCTCCACAAGAGTGACAAACGCATAGATACCCTGACCTTTCACCTCATGTTCTACACCTACAACAGCTGCCTCTGCAC
ATTGGGGATGTGAAGCCAGAGCAGATTCCACTTCAGCAGTTCCAATGCGGTGGCCACTGACGTTGATAACATCATCAACCCTTCCT
GTAAGCCAGTAGTAACCATCCTTGTCTCTGCTGCAACCATCACCACTAAAATAGTATCCAGCAAAAGGTTTGAAGTATGTGGTTTC
ATATCTTTCATGATCCCCAAACAAAGTTCGAAACGCCCCGGGCCATGATCCTTTCACACAAAGATAACCACTACACTCGCCTTCGA
TTTCATCTCCTTTTTCATCAACTATGACAGGCTGAACACCAAAGAAAGGGAAAGTAGCTGAACCAGGCTTCTGCGGCCAAGCACCT
GGCAACGGCGTTATCATGAAGCCACCAGTTTCAGTTTGCCACCATGTATCGGAAATGGGACACCTTGAATCACCAACTAGATTGAA
GAACCATCTCCATGCACTCGGATTGATGGGCTCACCCACACTTCCAAGTACTCGTAGCGATTTGCGAGAATGATTTGTCACAAACT
TATCATCATAACGCATGAGAGACCTCACCAATGTTGGAGCAGTGTAGAATATCGAAATCTTGTATTTGTCAACAATTTCCCAACAG
CGTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_198504 acetyl-CoA synthetase [Arabidopsis thaliana] | 1606 | 2e-176 |
| NP_001031974 acetyl-CoA synthetase [Arabidopsis thaliana] | 1606 | 2e-176 |
| XP_002870488 AMP binding protein [Arabidopsis lyrata subsp. lyrata] | 1599 | 1e-175 |
| AAB92552 acetyl-CoA synthetase [Arabidopsis thaliana] | 1592 | 8e-175 |
| XP_002512785 acetyl-CoA synthetase, putative [Ricinus communis] | 1541 | 7e-169 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q21LV0 Acetyl-coenzyme A synthetase | 1133 | 6e-123 |
| Q0AAW0 Acetyl-coenzyme A synthetase | 1113 | 1e-120 |
| Q4UP35 Acetyl-coenzyme A synthetase | 1110 | 3e-120 |
| Q8P3L1 Acetyl-coenzyme A synthetase | 1110 | 3e-120 |
| A7HSR8 Acetyl-coenzyme A synthetase | 1106 | 8e-120 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DGD6 AT5G36880 protein | 1606 | 1e-176 |
| Q9LTG4 Acetyl-CoA synthetase | 1606 | 1e-176 |
| O49063 Acetyl-CoA synthetase | 1592 | 6e-175 |
| B9RGS6 Acetyl-CoA synthetase, putative | 1541 | 5e-169 |
| C5XTB7 Putative uncharacterized protein Sb04g021370 | 1531 | 7e-168 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G36880.1 acetyl-CoA synthetase, putative / acetate-CoA ligase, putative | 1607 | 6e-179 |
| AT5G36880.2 acetyl-CoA synthetase, putative / acetate-CoA ligase, putative | 1607 | 6e-179 |
| AT3G48990.1 AMP-dependent synthetase and ligase family protein | 193 | 5e-015 |
| AT1G20510.1 OPCL1 (OPC-8:0 COA LIGASE1); 4-coumarate-CoA ligase | 190 | 1e-014 |
| AT3G16170.1 acyl-activating enzyme 13 (AAE13) | 188 | 2e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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