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Information for unigene UN20262

FASTA Sequence
Unigene ID: UN20262Length: 628  SNP
ATAATTCAAATGTCTAAATAATATTAAGGCCCAAGGATTAAGCAAAACAGAATAAGATGTTCAACAAAAATAAACTCAAAAGGATA
ACATATATAGGAACAAAACAAAAGTCTGAAACAAACAAAAAGCTGAGAAGTCGCTGGAATTCAAAGACAAGTTTTGTAGATTAAAA
AAAAGCATGAATCTAAGAATCAGCAATGGTGACCTCGACCTCAACACCAGGCTCAATGGTGATGGAAGTGATCTGCTTCACCACAT
CAGGAGAGCTGAACAGATCGATCACACGCTTGTGCACACGGAGCTCAAATCTGTCCCATGTGTTGGTTCCTTCACCACAAGGAGCT
TTCCTGGTGGTAATCTTGAGAACTTTGGTTGGCATCCTCACTGGTCCTTTCACTCTCAATCTCTTGTCTTTTGCTCCACGGACCAA
GTCAGTGCACACCTTCTCAAGGTTTTTGACATTCTTGGAGGAGAGAGTGATTCTGATCTTGTGAATCTGCTCTTGTGTCTCCTCAA
ATCCTGCCTTTCCTTGCTTCATTGGTGGTGCGTATGCCATAGCTATCTTCTACTTTTCTTTTCAAGTTCCTTAAGCAGAGAAGACA
GAAGATAGGAGCCGCTGAGTTGATGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002866483 40S ribosomal protein S20 [Arabidopsis lyrata subsp. lyrata]5823e-058
NP_201036 40S ribosomal protein S20-1 [Arabidopsis thaliana]5789e-058
XP_002866482 40S ribosomal protein S20 [Arabidopsis lyrata subsp. lyrata]5771e-057
CAB89318 40S ribsomomal protein [Arabidopsis thaliana]5708e-057
XP_002877555 40S ribosomal protein S20 [Arabidopsis lyrata subsp. lyrata]5691e-056

Swiss-Prot top hits (Blast detail)Scoree value
P49200 40S ribosomal protein S20-15785e-059
Q9STY6 40S ribosomal protein S20-25633e-057
P35686 40S ribosomal protein S205321e-053
Q3ZBH8 40S ribosomal protein S204324e-042
P60866 40S ribosomal protein S204324e-042

TrEMBL top hits (Blast detail)Scoree value
Q8H189 40S ribosomal protein S205706e-057
B9R9P7 40S ribosomal protein S20, putative5544e-055
C6TFE6 Putative uncharacterized protein5519e-055
A5AJ83 Putative uncharacterized protein5463e-054
C6T0U3 Putative uncharacterized protein5446e-054

Arabidopsis top hits (Blast detail)Scoree value
AT3G45030.1 40S ribosomal protein S20 (RPS20A)5793e-060
AT5G62300.1 40S ribosomal protein S20 (RPS20C)5793e-060
AT5G62300.2 40S ribosomal protein S20 (RPS20C)5793e-060
AT3G47370.2 40S ribosomal protein S20 (RPS20B)5642e-058
AT3G47370.1 40S ribosomal protein S20 (RPS20B)5642e-058

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  8%
 
65  19%
 
118  31%
 
127  27%
 
94  15%

Unigene MembersMember information