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Information for unigene UN20263

FASTA Sequence
Unigene ID: UN20263Length: 1026  SNP
GGGACAGATAACAGAAAAAGGTTGAAACTGTGAAAGTTTGGTGGGAAGGAAAAGCTTCTCATATTATTGCTTAATTACCCTTCCCG
GAGGAGATCGGAGATAATGGCTGCCAATTTCTGGGAATCGTCTCAATGCAAACGGCTTCTGGAACAAGAAGAAGTGGATGTAGTTC
ACCCTCTCGACAAAGAACGTGGAATTACAGTTGAGGATTTCAAGCTCATCAAGTTCCATATGTCTAATCATATAACGAAATTGGCT
CAGCACATTAAAGTCCGACAAAGGGTTGTGGCTACCGCAATTACGTATATGAGACGGGTTTATACCAAGAAGAGCATGGTGGAGTT
TGATCCGCGTCTTGTTGCTATTACATGCTTGTACCTGGCTTCCAAAGCTGAAGAGAGCATCGTCCAGGCCAGGAATCTTGTTTTTT
ACATCAAAAGATTGTATCCGGATGAGTACAAGTATGAACTAAAAGATCTATTAGGAATGGAGATGAAGGTCTTAGAAGCACTCAAC
TATTCGCTGGTTGTGTTTCACCCTTACCGCTCTTTATCTGAGTTTTTGCAAGATGCTGCATTGAACGATGTAAATATGAACCAGAT
GACATGGGGAATTGTCAACGATACATATAAGATGGACCTGATTCTTGTACACCCGCCGTATCGCATAGCGCTAGCGTGCATATACA
TAGCAAGTGTCCACAGAGAGAAAGATATCACTGCATGGTTACAAGATCTTAACGAGGACATGAACTTGGTGAAGAACATTGCCATG
GAGATTTTGGACTTCTACGAGAACTACAGAAGTATCACCGATGAAAAAGTGAGTTCTGCGTTCAACAAACTGACTATGAAGCCGTA
GCAGCTGGGGATTCGCCTCCATCTCCATGATTTATCTGATGCTCTCATCTTACAGCTAGACTTTCTTCAGTTGCCCATGTTAGTTT
TGTGGCAGACATGTATGTAACATTGTTGAATCTACCAAACATAAATCTTAAAGTGATAACTTCATCTATTTTTTTTGGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002865656 cyclin family protein [Arabidopsis lyrata subsp. lyrata]11634e-125
NP_199675 cyclin-C1-1 [Arabidopsis thaliana]11553e-124
BAB10697 cyclin C-like protein [Arabidopsis thaliana]11383e-122
XP_002301804 predicted protein [Populus trichocarpa]9672e-102
NP_199674 cyclin-C1-2 [Arabidopsis thaliana]9662e-102

Swiss-Prot top hits (Blast detail)Scoree value
Q9FJK6 Cyclin-C1-111551e-125
Q9FJK7 Cyclin-C1-29661e-103
P93411 Cyclin-C1-18593e-091
Q86KE7 Cyclin-C4856e-048
Q6CAC7 RNA polymerase II holoenzyme cyclin-like subunit2884e-025

TrEMBL top hits (Blast detail)Scoree value
B9GQM4 Predicted protein9671e-102
A9PI29 Predicted protein9446e-100
B7FHU4 Putative uncharacterized protein9446e-100
C5X4N7 Putative uncharacterized protein Sb02g0291408603e-090
B7EKR4 (RAP Annotation release2) Cyclin8594e-090

Arabidopsis top hits (Blast detail)Scoree value
AT5G48640.1 cyclin family protein11551e-126
AT5G48630.1 cyclin family protein9677e-105
AT1G35440.1 CYCT1;1 (CYCLIN T1;1); cyclin-dependent protein kinase1854e-014
AT2G26430.1 RCY1 (ARGININE-RICH CYCLIN 1); cyclin-dependent protein kinase regulator1235e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  11%
 
102  22%
 
85  56%
 
61  11%

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