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Information for unigene UN20268

FASTA Sequence
Unigene ID: UN20268Length: 840  SNP
GGGCCGGAGCAAGAAGAAAAGAAAACCAAAGAAACTTTAAAAAAAAAAACAGTGAACATAATGGGAAACAAAAATCTTAAGGCGAC
GTTGCTCCTCTTCACCACCTTTCTCTTCATTTCCCGATCAACCTCAGCCGTTCATTCTCCTCCACGACTAAACGCAACAACCAACG
ATCTAACTTTCATCCGAACAAGCTGCAACGCAACTCTATATCCAGACCTCTGCTTCAACTCTCTCGCTGGCTACGCCTCTGCCGTT
CAAAACAGTCCCGCGAGGCTAGCCAAACTAGCTATCGGAGTAACCATTTCAAAAGCTAAATCAACGGCTCTTTTTCTTACCAAGTT
CTCGCGCTCAGCAACCAAAGCCAAAGACTGTGCTTCTTACCTTAAAGACGCACTCGACGAGATGAGAGATTCTCTCCGAACACTAC
GCAACATTAGCCGCGGAGTAGGCATTGATGCGGCTCCGTCATCGGTGGAGATGTTTAGATTCAAGATGAGTGACGTGCAGACGTAC
ATGAGTGCAGCTTTGACGTATGAGGATACGTGTACGGACGAATATGATGAAACGGATGAAGTGGGAGGGACCAAGACCGCTGTTTA
TGATCGGGTGAACAATCTGAAGAGGTTAACTAGTAATGCTCTTGCGCTTGTTAACAGTTATGCCAACTATGGAGCTCCTTGAGATG
AGATCATGAAAGCGTTTTTTAACCTTTAATTTAAATGTTTCTTCTGATATTTATTTTTACTTTGTTAAATATTTCTTTTGAAAATT
TAGTATGATGTTTTATAAACTTTTAATTCTAAATCTATCATAGTTGAGTTTAGTGTGGGTTTGGAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_563960 plant invertase/pectin methylesterase inhibitor domain-containing protein [Arabidopsis thaliana]5522e-054
AAF79226 F10B6.30 [Arabidopsis thaliana]5469e-054
XP_002890079 invertase/pectin methylesterase inhibitor family protein [Arabidopsis lyrata subsp. lyrata]5413e-053
XP_002527780 21 kDa protein precursor, putative [Ricinus communis]3756e-034
NP_564998 plant invertase/pectin methylesterase inhibitor domain-containing protein [Arabidopsis thaliana]3532e-031

Swiss-Prot top hits (Blast detail)Scoree value
P17407 21 kDa protein2571e-021
Q43111 Pectinesterase 31692e-011
O04886 Pectinesterase 11665e-011
P83948 Pectinesterase 31656e-011

TrEMBL top hits (Blast detail)Scoree value
Q9LQU1 F10B6.305466e-054
B9HW39 Predicted protein3782e-034
B9SP61 21 kDa protein, putative3754e-034
A5BDK7 Putative uncharacterized protein3665e-033
A0MEF6 Putative uncharacterized protein (Fragment)3531e-031

Arabidopsis top hits (Blast detail)Scoree value
AT1G14890.1 enzyme inhibitor/ pectinesterase/ pectinesterase inhibitor5527e-057
AT1G70720.1 invertase/pectin methylesterase inhibitor family protein3539e-034
AT1G23205.1 invertase/pectin methylesterase inhibitor family protein3422e-032
AT2G01610.1 invertase/pectin methylesterase inhibitor family protein3351e-031
AT3G47380.1 invertase/pectin methylesterase inhibitor family protein3261e-030

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  12%
 
117  41%
 
63  18%
 
125  29%

Unigene MembersMember information