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Information for unigene UN20269
| FASTA Sequence |
| Unigene ID: UN20269 | Length: 765 |
| SNP | GGGACACTCAATTCACCCACAACATAGCTAGTGGAACAGTGTATTCTAAAAAAATGGCTTCAAGCTCCATAGCCCTTTTCTTGGCT
CTCAACCTCATGTTCTTCACAACAATCTCCGCATGCGGTAGCTGCACTCCTTGCGGAGGAGGTTGCCCCTCTCCCAAGCCCAAGCC
AACTCCTAAACCAACCCCAAGCCCTAGCTCTGGCAAGGGAAAGTGCCCTAAAGATACCCTCAAGCTTGGTGTCTGCGCCAATGTAC
TCAATGGCCTCCTCGACTTGACCCTCGGCAAGCCACCGGTCAAGCCATGCTGTAGCCTCATCCAAGGACTCGCTGATGTTGAAGCA
GCCGTTTGTCTCTGCACCGCTCTTAAGGCTAACGTTCTTGGAATCAACTTGAACCTCCCAATCTCTCTAAGTCTTCTCCTCAATGT
TTGCAGCAAACAAGTTCCTCCTGGCTTCCAGTGCTAAGCAATCGTACCATATGTAATTTCAGTACACGAATGTGTATATTTATCTT
CTTGTTTTGGACAGACAAGGTGATTCTGTTTACTCTTATTATTGTGTCCCTCTATATTTGTGTTCTTATTACAATCTTCTTGTTAT
GGGGTTCATTGGAGCCAAATTGTGTCTCTATCCGGATGATCCTTACGATTCTTGAAGTTAACAGTTCCATTATTTCCCGTTACTCT
TTATATTGGGGTAATTGTTGTACTATGATCCTATGAAAATAAATCAATTATATTTTATGTTATACGTTAAAAAAAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_172673 extensin-like protein [Arabidopsis thaliana] | 711 | 5e-073 |
| AAK30571 extensin-like protein [Brassica napus] | 704 | 4e-072 |
| XP_002892674 hypothetical protein ARALYDRAFT_471359 [Arabidopsis lyrata subsp. lyrata] | 696 | 3e-071 |
| XP_002529775 14 kDa proline-rich protein DC2.15 precursor, putative [Ricinus communis] | 538 | 6e-053 |
| ABG91752 HyPRP2 [Gossypium hirsutum] | 526 | 2e-051 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P14009 14 kDa proline-rich protein DC2.15 | 442 | 4e-043 |
| Q01595 Cortical cell-delineating protein | 272 | 2e-023 |
| Q00451 36.4 kDa proline-rich protein | 251 | 6e-021 |
| P24337 Hydrophobic seed protein | 144 | 1e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O65369 At1g12090/T28K15.14 | 711 | 4e-073 |
| Q9AT52 Extensin-like protein | 704 | 2e-072 |
| B9SUW4 14 kDa proline-rich protein DC2.15, putative | 538 | 4e-053 |
| Q0PIW2 HyPRP2 | 526 | 1e-051 |
| P93512 Proline-rich SAC51 protein | 525 | 1e-051 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G12090.1 ELP (EXTENSIN-LIKE PROTEIN); lipid binding | 712 | 2e-075 |
| AT1G62510.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | 466 | 6e-047 |
| AT4G12520.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | 431 | 7e-043 |
| AT4G12510.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | 431 | 7e-043 |
| AT2G45180.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | 386 | 1e-037 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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