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Information for unigene UN20285

FASTA Sequence
Unigene ID: UN20285Length: 1079 SSR 
GGATCTCAAAACCAACAAAACAAACAAAAAAAAACTTTTTCAAATCCCTAAAAGAGATGTCGACGGAGGAAGAACCCAAGGTCGTG
GAGTCAGGAGACGCCGAAGCCGACGCCACGGTGACGACGACGACGGAGAAGAAACCTGCTAAAGCTAAAGCTAAGAAGACGAAGGA
AGCTAAGAAGAAGCCTGCTGCTGCTGCTGCACCGAGGAAGAGAACCACTTCGTCTCATCCTCCTTACGAAGAGATGATAAAGGATG
CGATCGTGACGTTGAAGGAGAGGACCGGATCTAGCCAATACGCGATTCAGAAGTTCATCGAGGAGAAGCAGAAGTCGCTTCCTCCT
ACTTTCAGGAAGCTTCTTCTCGTCAATCTCAGGAGACTCGTCGCTTCCGGGAAGCTCGTCAAAGTCAAAGCCTCTTTCAAGATTCC
TTCTGCTTCAGCGGCTAAACCGGCTGCGGTTAAGAAGAAACCGGCTGCTACGGTTACTAAACCGAAGGGTAAAGCAGCTGCTGCTC
CTGCTAAGAAGGCCAAACCAGCTGCTAAAGGAACCAAGAAACCTGCTGCTTCTGCTGCTAAGCCTAAGGCAAAGACAACGACAACT
AAAGCTGCTGCGAAGCCGAAAGTTACTGCGAAGCCTAAGACGAAGAGTGTAGCTGCTGTTTCGAAGACGAAGGCGGTTGCTGCGAA
GCCTAAGGCGAAGGAGAGACCTGCTAAAGCTTCGAGGACTTCGAGTAGGACATCTCCAGGGAAGAAGGCTGCTCCTGCTAAGAAAG
CGGCTGCTCCTGCGGCTAAGAAAGCTGCGGCGAGTAAGAAGGTTCCGGCTAAGAGTGCGAAGGTGAAGTCTCCGGCGAAAAGGGCT
TCGACGAGGAAGAAGTGATGATGGTTTAGCTTCTCTTAGGGTTATAAGTCTTTTGTATAATTGAATCGTCTATGAAGGGGGCTTGT
TTTTTTACTTCCAAAGTTTATGTTTTGTTATATTTGTCTTTGGTTTCTTCTCGAAACCCTTTTATCTTGTAATTTTTGGTTTGTTT
GGAATTTTAATAGCTATATGTGATGGTTTGCAAATATGTGCTTATGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_180620 histone H1.2 [Arabidopsis thaliana]8193e-085
XP_002879272 hypothetical protein ARALYDRAFT_481979 [Arabidopsis lyrata subsp. lyrata]7575e-078
XP_002892357 expressed protein [Arabidopsis lyrata subsp. lyrata]6723e-068
NP_172161 histone H1.1 [Arabidopsis thaliana]6492e-065
CAA44312 histone H1-1 [Arabidopsis thaliana]6213e-062

Swiss-Prot top hits (Blast detail)Scoree value
P26569 Histone H1.28226e-087
P26568 Histone H1.16595e-068
P37218 Histone H15628e-057
P08283 Histone H15304e-053
P23444 Histone H14525e-044

TrEMBL top hits (Blast detail)Scoree value
B9GS56 Histone H16642e-067
B9H8I5 Histone H16095e-061
Q9AT20 Histone H1 (Fragment)5772e-057
Q9AT18 Histone H1 (Fragment)5754e-057
Q9AT19 Histone H1 (Fragment)5745e-057

Arabidopsis top hits (Blast detail)Scoree value
AT2G30620.1 histone H1.28243e-088
AT1G06760.1 histone H1, putative6594e-069
AT2G18050.1 HIS1-3 (HISTONE H1-3); DNA binding / nucleosomal DNA binding2491e-021
AT2G18050.2 HIS1-3 (HISTONE H1-3); DNA binding / nucleosomal DNA binding1863e-014
AT1G14900.1 HMGA (HIGH MOBILITY GROUP A); DNA binding1792e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
627  63%
 
812  28%
 
112  5%
 
102  5%

Unigene MembersMember information