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Information for unigene UN20290
| FASTA Sequence |
| Unigene ID: UN20290 | Length: 865 |
| SNP | GCTTTAGAGAAACTCGCTGATTTTACTGATATAGTGTTGTAACCCAAAGTCTCATGTGACTAATACATATGTAAAGAAACACACCG
TAGGCTTAACCACACTAATCAAACAAGATTACTTCACAGAATTCAGGGGTAAAACTGTAATATAACATTCCCCCCTCCAATAAGAA
AGTTCCTTTTCTCAGACAAGGGTCCCACCCTTGACAAACTCAGTAAACGCCAACGCGACCAAACCAAGCATCGCGAAACGTCCGTT
CCAAAGCTCAGCGTCGGATGTCATGAAACCTTTGGACTTAGACTCGGCGGTGATACCCTTGAAAAGGGGTACAAGCGACGCAAGCG
TCAAGATCGCAGTCGTACCGAGGAACCACGAGACGCCACCGTCAGAGATCTGAGCCAAAACGTTTTCACCCTTGGAAAGTTCAACC
GCCAAGGCTGCCACGAACCCAACCATCGCTAGACGCCCGTTTATTCTTTCTGGTGCTGGACCGCTAAACGCTAGCAAGTCGCTAAA
CTTCGTGCTCACCTTTGGTTTAGTAGGACGTGGAGGAGGTGGAGGAGGTGATGAACTAGACAAAGGCTGAGCAGCGGAGGTGGAAG
GTGCAGACTCATCCTTCATGGGTTCTCCCTCAGCCATGCACCTCACTCCAACCGGATAATTCCTCTTGAGATTTGGGAGGCTTCCG
GCGAAGAAGAGCTTGTTTGTGTTGATCTTGCGAGTGGCCAACCCACCGGCGAAGACTGACTGCATGTTAACCGATGCTGTTGCCAT
TTCTAAAACTTTGGTGTTTGAATGAAATACAGGAGAAAGTATGAAATAAAGGCTATTAAACTGTGAGGTGGATCTTAGCTATAGAG
TTGGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAR11456 ELIP [Brassica rapa subsp. pekinensis] | 920 | 4e-097 |
| NP_188923 chlorophyll A-B binding, early light-inducible protein [Arabidopsis thaliana] | 850 | 5e-089 |
| XP_002885526 early light-inducable protein [Arabidopsis lyrata subsp. lyrata] | 760 | 1e-078 |
| AAM67121 light-induced protein-like protein [Arabidopsis thaliana] | 709 | 1e-072 |
| NP_567438 early light-inducible protein 2 [Arabidopsis thaliana] | 691 | 1e-070 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P11432 Early light-induced protein, chloroplastic | 527 | 7e-053 |
| Q01931 Desiccation stress protein DSP-22, chloroplastic | 405 | 9e-039 |
| P14895 High molecular mass early light-inducible protein HV58, chloroplastic | 377 | 2e-035 |
| P14897 Low molecular mass early light-inducible protein HV90, chloroplastic | 374 | 4e-035 |
| P14896 Low molecular mass early light-inducible protein HV60, chloroplastic | 369 | 1e-034 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q6T6I9 ELIP | 920 | 3e-097 |
| P93735 AT3g22840/MWI23_21 | 850 | 4e-089 |
| Q8L8U1 Light-induced protein-like protein | 709 | 8e-073 |
| Q94K66 Putative uncharacterized protein At4g14690 | 691 | 1e-070 |
| O23325 Light induced protein like | 687 | 3e-070 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G22840.1 ELIP1 (EARLY LIGHT-INDUCABLE PROTEIN); chlorophyll binding | 856 | 4e-092 |
| AT4G14690.1 ELIP2 (EARLY LIGHT-INDUCIBLE PROTEIN 2); chlorophyll binding | 692 | 5e-073 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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