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Information for unigene UN20295

FASTA Sequence
Unigene ID: UN20295Length: 724  SNP
GGATAACTCAAAATATCTACGAACACAAGAAGAAAAAAATGGAATCTACTTTAAACACTACCGCACGAATCGGGAGCTGGTCATCG
GTTATATCTCCACCTCTACAAGTGTGTGAATCTTTCAAGTGGAAGCTACCAAAGGCAACAAGAAGAGTCGTCGTCAGTGTTGCAGA
TCGTCAGAACTCAAACTTCCGATGGAGGAAAGTAACAACAGGCAGAGCAAATGTTGCGGCGGAAGCATCTAGAGTTCCGACATCAG
TACCGGTGAGAGTTGCGCGTGAGCTAGCTCAAGCAGGATACAAATATCTCGACGTGAGGACACCGGACGAGTTCAGCATCGGACAT
CCGTGTAGTGCTATTAACGTGCCTTACATGTACAGAGTCGGATCAGGAATGGTTAAGAACCCGAGTTTTCTAAGGCAGGTCTCGTC
TCATTTCAGGAAACACGACGAGATCATCATCGGTTGTGAGAGCGGGGAAAGATCTCTCATGGCTTCCACTGAACTTCTCACTGCTG
GCTTCACCGGGGTTACAGACATTGCTGGAGGGTACGTTGCCTGGACAGAGAATGAACTACCAGTAGAAGAGTGAAAACAAAAAACA
TGAACCTATCCGTTTGTAAATTTGCAAATAAATAATTGTATATGTTTCAACACAAGTGTTTGTGTATGTCAATGGCACTACCAAAT
GATATAAGTTTCATTTGGAACAAAAATCTCATAGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAA20356 din1 [Raphanus sativus]9113e-096
P27626 RecName: Full=Senescence-associated protein DIN18872e-093
BAJ34346 unnamed protein product [Thellungiella halophila]7761e-080
NP_195302 senescence-associated protein DIN1 [Arabidopsis thaliana]7545e-078
AAM61743 senescence-associated protein sen1 [Arabidopsis thaliana]7537e-078

Swiss-Prot top hits (Blast detail)Scoree value
P27626 Senescence-associated protein DIN18879e-095
Q39129 Thiosulfate sulfurtransferase, chloroplastic4049e-039

TrEMBL top hits (Blast detail)Scoree value
O04410 Din19112e-096
Q38853 AT4g35770/F8D20_2807543e-078
Q8LEW3 Senescence-associated protein sen17535e-078
Q38852 Senescence-associated protein7482e-077
A8MRI9 Uncharacterized protein At4g35770.36316e-064

Arabidopsis top hits (Blast detail)Scoree value
AT4G35770.1 SEN1 (SENESCENCE 1)7552e-080
AT4G35770.2 SEN1 (SENESCENCE 1)6342e-066
AT4G35770.3 SEN1 (SENESCENCE 1)6342e-066
AT5G66040.1 STR16 (SULFURTRANSFERASE PROTEIN 16)4049e-040
AT5G66170.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17850.1); Has 730 Blast hits to 728 proteins in 227 species: Archae - 18; Bacteria - 429; Metazoa - 13; Fungi - 9; Plants - 103; Viruses - 0; Other Eukaryotes - 158 (source: NCBI BLink).2703e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
79  39%
 
66  26%
 
95  22%
 
192  9%
 
211  4%

Unigene MembersMember information