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Information for unigene UN20311
| FASTA Sequence |
| Unigene ID: UN20311 | Length: 1769 |
SSR | | GAAAAGGCAACAACACTTTTATTTTATATATTTCATAACAAGCATTTGATATTATATATATTTATAATTAGAAGAAAAGAGAAGCA
CAGAAGAAAATAAATAATAATAATAAGTAACGCGTGCGAACAAACAGTACGGATTTACCCTTGACTCTCTAAAAGCTAGCCTTCCT
CAGAGACGTGAATTTAACGGAGCTTCCCAACGGCGATGAACCGACCTCAATATCAAACGAATCATACCTCCTGAAAATCTCAATCA
AAAACAACCTCGCGACCAAAACAACGAAGTCCTTACCGGCGCACTGTTTATTCCCCACGGTCGGATTCTCCGTCTGCGGACCATTC
GACCACACGACATGCTGCAACAACCTCTCTCCTTCCTCCCCGAGGAATCTCTCCGGCAGAAACTCCTCTGCTCTTTCGAATATCTT
CGGATCCCTAGTCGCAAGCGGTTGATACCCGTAAAGCATTTCTCCAGCCTTGACTCTAAACGCCGCGTCGTGGCTCTCGACAACAA
AGTCCTTCTTCGCACGTGCGTATTGCGCCGGAACCGGCGGTTCGAACCGGAGACATTCGAAGACGACTGATTTCGTGAGCTCCATC
TGCTCAATCCCTCCCATCGTGAGCTCTCCGCCGTTGGATTCGATAACCGATCTTATCTCCTCAGCTAACCGGATCTGGAGTTTGGT
ACCCGCCCGCCCGACCCGTTTAACCAGGTTCGAGAAGAGGATCTTCATCCCTCCCCACGTGTTGAAGCACGTGGCGAAGAGGAGGT
TGTGAGCAGCTTCCTCTCGCGAGATACCCAATTTCTCAGCCTCAACTAGAATCTCTCCCGAATATTCGAGGAAGAACTCGTAGAGT
CTCTGGTAATCAGACTTGACTAACGACGAAGGTAACCGGAAAGTATGGAGAAGAGGATCTTCTATGATTGAGGGTAGTCCGAGAGT
CAATAAAGGATGGAGATTGAAGAAGACCCATTTCGTTATCAGACTCGGCGCATCGGATCCAAGCTTCGTATCAGCTGGATTCTTCC
CGTACATAGCTCGAGCCAAGAAATTGAAAGCTGCTGCGTCACCTGGACCGCCAAAATCTGCTTTTCCGTTGTCGGCGAGCTCTTTC
TCGATCGAATCGAAAAGCTCCGAGTAGGTGGCTTTAAACTCCGGGAAGATTCGGTTTCGAGAGGACTTGAGTAGATGGAAGAGTAA
AGATTTGAGCTTGGCGTGTTTCGGCTCTGATGGGTCGAGGTATGATAAGATACGGTAGCCTCCGGTTAGATCCGTCGAGGGCATGT
AGGTTCCGGTGAAAAGATCTTTCTTCTCCACTTTATCCACATCGAACAAAACCGGGAAGCTTTTACCGTCGAGTAAAGCAACGACT
TGTGGATTCTCGGCTATGAAACCTCCGGGTGGCATGTTGACTCGAAACACTGTGGAGTTGTACTTACGGATTCGTGATTTGAAGTA
CTCCTCTGGTTTTTGCGTGTGGAAGTAATCGTTACGGTCTTTTAGTGGACCTATTATTGGTAGACCGTAGCTTCCAGGGATTGTTC
GGATCGGGAGATCTTTGGATCCGGATCCGGTGCGGGTTGCCACGGCTAGATCAGGAGGAGTTTCTGACGTTGAGGCTTTGATCGGA
CGGGCTAAAACTCGAGTCGACGAGAATTTTAACGGCGTTGATCGAACGATTGTTGGTTGGTGGATCCGAGCTTGTAGAGAAATTGG
GTGTGGAGTTGAAGCAGAGGCCATTTTGTGTGTGTGTGTGTTTGAATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002865507 hypothetical protein ARALYDRAFT_494777 [Arabidopsis lyrata subsp. lyrata] | 2257 | 1e-251 |
| NP_199079 allene oxide synthase [Arabidopsis thaliana] | 2205 | 1e-245 |
| 2RCH Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed With 13(S)-Hod At 1.85 A Resolution | 2146 | 8e-239 |
| 2RCM Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450 74a) At 1.73 A Resolution | 2140 | 4e-238 |
| CAD29735 allene oxide synthase [Solanum tuberosum] | 1785 | 6e-197 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q96242 Allene oxide synthase, chloroplastic | 2205 | 5e-247 |
| P48417 Allene oxide synthase, chloroplastic | 1653 | 5e-183 |
| Q40778 Allene oxide synthase | 1603 | 3e-177 |
| Q7Y0C8 Allene oxide synthase 1, chloroplastic | 1543 | 3e-170 |
| Q7XYS3 Allene oxide synthase 2 | 1334 | 5e-146 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8RW07 Allene oxide synthase (Fragment) | 1785 | 4e-197 |
| Q4ZJ74 Allene oxide synthase | 1780 | 1e-196 |
| A1X873 Allene oxide synthase protein | 1772 | 1e-195 |
| Q84V85 Allene oxide synthase | 1771 | 2e-195 |
| Q2PJB7 Latex allene oxide synthase | 1763 | 1e-194 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G42650.1 AOS (ALLENE OXIDE SYNTHASE); allene oxide synthase/ hydro-lyase/ oxygen binding | 2206 | 3e-248 |
| AT4G15440.1 HPL1 (HYDROPEROXIDE LYASE 1); electron carrier/ heme binding / iron ion binding / monooxygenase | 756 | 4e-080 |
| AT3G53280.1 CYP71B5 (CYTOCHROME P450 71B5); electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | 118 | 4e-006 |
| AT3G44250.1 CYP71B38; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | 117 | 5e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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