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Information for unigene UN20320
| FASTA Sequence |
| Unigene ID: UN20320 | Length: 1336 |
| SNP | GGGAGGGAAAACATTTGTTTGTGTTGTGTCTGGTGATATCGATTTTTTCGAGGGGAGGAAAGAAGAGAAAAAAAGAGAAGTGCGAA
GAATCATTAATCGTAGATGGGAGAATCGAGGTCGTTTGCGGAGGGATTCAAGGGGTTCTGGGAGGAGAGGTTGTCGTTCCTGGAGA
ATTACACGAGGTTCACCAAACGCGACACGCCTCTTCCTTCTTGGTCTTCCTCCGACGTTGAGGAGTTCATAGCTTCCGATCCCGTT
CATGGACCCACCCTGAAAACAGCTAGGGAAGCTGCGACTTTTGGTGTTGCCGGAGCTGCACTCGGAGCTCTATCTACTGCCGCTTT
TGCCTGGAAATATTCTAGGAGTCCGCATGGTGCTGCATTGTCCTTCTTAGGAGGAGGTGTTTTTGGTTGGACCTTTGGGCAGGAAG
TTGCGAACCACACCTTGCAACTCTATAAGCTGGACACAATGGCGGCTCAAGTTAAGTTCATGGAATGGTGGGAGCGCAAATCTCAA
TGAAGGTCTTGAATCCAAAATAACAAAGACTGTTGCTACTTTTTCCATCGAAGTATCTATATTGCAATCAGCTTGAAATGTGATAA
AAGTTAAATCCATTTCCAGACCTTTTTTATTATGTTATCACTCGTTGAACATGTTTGTTTTTCTTGTCTCAATAATACATGTCCTC
ACATGGAGAGTGTTTTTTTGTGGAACCGAATTTGAAAGAAACCCAATAATGAAATGGTCTCAAAATATTGGGACTTGAAGATGATA
AGTAAATAATTAGCCTTTGAAGCATATATATAGCATACAACAAGCTGCGAGATCCAGGGGTAAGGTGTACTCCACTCTATTTGAAA
GAATTGAAGAAGCTCACAGTGTCTGCAAGTGCAACGATGAAGGAGTCAACGTCTTCCTTTGTGTTGTAAAAGTAAAGGCTGGCGCG
TGCACTTGCATTCACTCCAAGATACCGGTGTAGTGGCTGCGCGCAGTGGTGTCCTGACCTTATCGCAACTCCATGCTGTTGATCAA
GAAAGGTTGCCAAATCAGTTGGGTGCAGTCCCTCCACATTGAAGGAACAAAGAGCTGCCCTTCGAACACTTTCAGAAGGCCTTGGG
CCGTATATCCGAACATCAGGCACTGAAGACAGTTTCTCGTACAAATAGTTAGCAAGCTCTACCTCATATTCATGGATTTTCGGCAT
GCCAATATCTGACAAGTAATCACATGCTGCTCCAAGGGCAATTGCTTCACCAATTGCAGGTGTTCCAGCTTCAAATCTGGATGGAG
GTTCTGCATAAGTCGAATGATCAAGAAATACACCTGAGATCATTTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002892460 hypothetical protein ARALYDRAFT_470910 [Arabidopsis lyrata subsp. lyrata] | 794 | 3e-082 |
| NP_172325 cysteine desulfurase 2 [Arabidopsis thaliana] | 787 | 2e-081 |
| XP_002314018 predicted protein [Populus trichocarpa] | 731 | 6e-075 |
| XP_002523229 cysteine desulfurylase, putative [Ricinus communis] | 725 | 3e-074 |
| XP_002267920 PREDICTED: hypothetical protein [Vitis vinifera] | 703 | 1e-071 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q93WX6 Cysteine desulfurase 2, chloroplastic | 787 | 9e-083 |
| Q55793 Probable cysteine desulfurase | 503 | 8e-050 |
| Q5HHH0 Probable cysteine desulfurase | 391 | 7e-037 |
| Q6GIH2 Probable cysteine desulfurase | 391 | 7e-037 |
| Q6GB11 Probable cysteine desulfurase | 391 | 7e-037 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9HNK4 Predicted protein | 731 | 4e-075 |
| B9SB60 Cysteine desulfurylase, putative | 725 | 2e-074 |
| C6T0Q8 Putative uncharacterized protein | 701 | 1e-071 |
| A9NXQ9 Putative uncharacterized protein | 679 | 5e-069 |
| Q941A6 At1g08480/T27G7_10 | 661 | 6e-067 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G08490.1 CPNIFS (CHLOROPLASTIC NIFS-LIKE CYSTEINE DESULFURASE); cysteine desulfurase/ selenocysteine lyase/ transaminase | 788 | 6e-084 |
| AT1G08480.1 unknown protein | 662 | 2e-069 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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