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Information for unigene UN20340

FASTA Sequence
Unigene ID: UN20340Length: 1019 SSR 
GGGAACAAAACGAAAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGACGCAGAGGTGAATTAGAAATAACAGTCAAAAGAGTGAGA
GATGGCGAGATATGATCGAGCAATCACAGTGTTCTCCCCAGACGGCCACCTTTTTCAGGTAGAGTATGCCCTAGAAGCTGTCCGTA
AGGGTAACGCCGCCGTCGGAGTCCGCGGCACCGATACCGTCGTCCTCGCCGTCGAGAAGAAATCCACCCCTAAGCTCCAGGATACA
AGATCAGCTAGGAAGATTGTGAGTCTAGATAACCACGTGGCGTTGGCCTGTGCTGGGCTCAAGGCAGATGCTCGTGTCCTGATCAA
CAAGGCGAGGATCGAGTGTCAAAGCCACAGGCTTACGTTGGAGGATCCCGTGACTGTCGAGTACATCACTCGGTACATTGCTGGGC
TTCAGCAGAAGTACACTCAAAGTGGGGGTGTTAGACCTTTTGGTCTTTCCACTCTTATTGTCGGTTTTGATCCCTACACTCGTATT
CCTTCGCTTTATCAGACTGATCCATCTGGGACGTTCTCTGCTTGGAAGGCTAATGCGACCGGGAGAAACTCGAACTCGATCAGGGA
GTTTCTGGAGAAGAATTATAAAGAAACCTCTGGTCAAGAAACTGTGAAGCTTGCTATCCGTGCTCTGCTTGAGGTTGTTGAGAGTG
GGGGAAAGAACATTGAGGTTGCTCTGATGACACGGGAGGAAGGTACTCTGAGGCAGCTAGAAGAAGCTGAAATCGATGCTATTGTG
GCTGAGATCGAAGCAGAGAAGGCTGCTGCAGAAGCAGCCAAGAAAGGCCCTTCAAAGGAAATCTGAGCATGATGCCAGATCTTTAC
AATAACGGTCTCAGTTTTCAAGTTGTAACTTTTGGTTCAAATTATGTTATTTTGAGGGTTGAATAGAAAATCTTGACTGCGTGAAT
TTGTTTTGTTGGATCATTAGCCTGTGTTGACGACATTTTCGCTTTAAATCTTAATCGACAATTTTAGCAAAGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_190694 proteasome subunit alpha type-7-A [Arabidopsis thaliana]12021e-129
AAM64989 multicatalytic endopeptidase complex alpha chain [Arabidopsis thaliana]11992e-129
NP_201415 proteasome subunit alpha type-7-B [Arabidopsis thaliana]11983e-129
XP_002865085 hypothetical protein ARALYDRAFT_920118 [Arabidopsis lyrata subsp. lyrata]11983e-129
XP_002876077 multicatalytic endopeptidase [Arabidopsis lyrata subsp. lyrata]11931e-128

Swiss-Prot top hits (Blast detail)Scoree value
P30186 Proteasome subunit alpha type-7-A12025e-131
O24616 Proteasome subunit alpha type-7-B11981e-130
Q9SXU1 Proteasome subunit alpha type-711452e-124
O24030 Proteasome subunit alpha type-711344e-123
A2YXU2 Proteasome subunit alpha type-7-A11254e-122

TrEMBL top hits (Blast detail)Scoree value
Q3HVM9 Proteasome subunit alpha type11605e-125
Q2V988 Proteasome subunit alpha type11597e-125
Q38HT8 Proteasome subunit alpha type11533e-124
B9SXV7 Proteasome subunit alpha type11401e-122
Q2V3Q0 Uncharacterized protein At3g51260.211292e-121

Arabidopsis top hits (Blast detail)Scoree value
AT3G51260.1 PAD1 (20s proteasome alpha subunit pad1); endopeptidase/ peptidase/ threonine-type endopeptidase12024e-132
AT5G66140.1 PAD2 (PROTEASOME ALPHA SUBUNIT D 2); endopeptidase/ peptidase/ threonine-type endopeptidase11981e-131
AT3G51260.2 PAD1 (20s proteasome alpha subunit pad1); endopeptidase/ peptidase/ threonine-type endopeptidase11585e-127
AT3G22110.1 PAC1; endopeptidase/ peptidase/ threonine-type endopeptidase4282e-042
AT1G16470.1 PAB1 (PROTEASOME SUBUNIT PAB1); endopeptidase/ peptidase/ threonine-type endopeptidase4122e-040

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  22%
 
102  22%
 
113  33%
 
181  11%
 
61  11%

Unigene MembersMember information