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Information for unigene UN20345

FASTA Sequence
Unigene ID: UN20345Length: 1277  SNP
GGACAGTTACCACTCTATGTCTGAATTTAAAACTGATGTAGTTTTTTCTTTTTCTTTTTTTCTTTTGTAGCTCCGAACAGAGGAAT
GAACTGGTCATTCTCAAAGAAAGGCTCTGCTGCTTCTTCTCAGTTTCTATCTTTCAGGGCATCTCAAGATGACAGACATAGAAAGC
CTGGAAACTATCATCCTCTCCCACACTCTGGTTCCTTCATGCCATCATCAGTAGCAGCAGATGTATACGATTCTAACCGGAACACT
CCTTACAGTTCTGTACAGGGAGCCCAGGATGTTCCCTAATTTGTAATCAACAGCAAATCTATCTCAGTTTTCCATGGCCAGGCCGG
GTCTCCAGTCTCATTATGCACCAGGAGGAAAAAGCTTCATGAGCAATGGCATAAACTCACAACCTTATGCAGTAGTTCCTATCATG
GCACCTCCAATCTCAGTCCTTCCTGCTCCAGGTTCCATTTGTAGGGACAACTGATATTAGATCTTCTTCCAAGCCATTAGGATCAC
CAACTCAGTTGACCATCTTTTATGCCGGTTCAGTTTGTGTTTATGATGACATATCTCCTGACAAGGCCAAGGCGATAATGTTGCTT
GCTGGAAACGGTTCCTCTATGCCTCAAGCCTTCTCACCACCTCAAACGCATCATCAACAAGTCATCCACCATCATGCTCGTGCCTC
TGTTGATTCTTCTTCAGCTATGCCTCCTAGCTTCATGCCTACAGTCTCTTATCTTAGCCCTGAAGCTGGAAGTAGCACAACTGTAC
TCGGAGCCAGAGGCTTTACATCAACATACCACAACAATCAAACTAATGCTTCTACTGTAAAGCCTCAAACAGTGGCTTTGCCTCAG
GCTCGCAAAGCATCTCTGGCTAGGTTCTTAGAGAAACGCAAAGAAAGGGTCACAAGTGTATCGCCGTATTGCTTGGACAAGAAGTC
ATCAACAGATTGTCGTACAGCAATATCTGAATGCATAAGTTCGTCATTCAGCTCTGCAACCTAAAATCTCATTTTGCAGTAGTACT
GCTTCAGACCACTCCAGAGCGCAGTCATTACTTTGCATCTCAATGGTGATTTTTTTCAGTTTTCCAGTTTTTATCTTCTTTTTTTC
TGTTACAGAATTTTCCTTTTTCTCTGGTTACACTTGAGAATTTTCTTAGCTTATATACCATAGTGTAACTTTTTCTCTGTACGCTA
CAGTGAGTTTCTTCTTAGCTTATACACTTGGATTATTTGATTTTGGTCGAATGGAACTTAAAACTTTTTTTGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002883092 hypothetical protein ARALYDRAFT_479270 [Arabidopsis lyrata subsp. lyrata]6959e-071
NP_566590 protein TIFY 6B [Arabidopsis thaliana]5022e-048
NP_974330 protein TIFY 6B [Arabidopsis thaliana]5022e-048
AAM67301 unknown [Arabidopsis thaliana]5022e-048
NP_001078174 protein TIFY 6B [Arabidopsis thaliana]5022e-048

Swiss-Prot top hits (Blast detail)Scoree value
Q9LVI4 Protein TIFY 6B5029e-050
Q58G47 Protein TIFY 6A4203e-040
Q8W4J8 Protein TIFY 71344e-007

TrEMBL top hits (Blast detail)Scoree value
A8MR24 Uncharacterized protein At3g17860.25021e-048
B3H4G3 Uncharacterized protein At1g48500.23273e-028
B3H630 Uncharacterized protein At1g48500.33273e-028
B9SXR5 Putative uncharacterized protein2054e-014
B9I2C6 Predicted protein2029e-014

Arabidopsis top hits (Blast detail)Scoree value
AT3G17860.1 JAZ3 (JASMONATE-ZIM-DOMAIN PROTEIN 3)5028e-051
AT3G17860.2 JAZ3 (JASMONATE-ZIM-DOMAIN PROTEIN 3)5028e-051
AT3G17860.3 JAZ3 (JASMONATE-ZIM-DOMAIN PROTEIN 3)5028e-051
AT1G48500.1 JAZ4 (JASMONATE-ZIM-DOMAIN PROTEIN 4)4203e-041
AT1G48500.2 JAZ4 (JASMONATE-ZIM-DOMAIN PROTEIN 4)3272e-030

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  22%
 
92  22%
 
123  33%
 
81  11%
 
101  11%

Unigene MembersMember information