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Information for unigene UN20400

FASTA Sequence
Unigene ID: UN20400Length: 1045 SSR 
ATCATTAAGAAGGCAATAATTGGAAAATAAATACACAAATGAGTCATTTTCTGAATCCATATTAAAGATTGCACATAATGCTTTGA
GAAAAATGTCCTGGGAGAGAGCTAATAGCTTAATTTCTTTTGGCAGATCAAAAAATACCCATCCCGAAGTCAGTTTTTGGTGTTTT
CAATCTTGTCTTGGAGGGGATGTGGCCGTTGATGTACTTTGGGTTGCTTTCTTCGTAGAAGATGTTTGTTGAGTCTGAGTTTGATC
GCCGGCTTCACCTGGAGACAAAGCTTGAGCTGCTCTTCTGTAATCTTGAGGTAATCCTCGGTTGTGTAAGCTTTTGGTGATTGAAC
ATCATTCGGACCACTTGCAGCAGTCACAGGATCTTCAGTGCTAGGAACTGATGTTGGTGGTGGTGGTGGAGTGTTCATTCTGTTCT
GGTTGTACACATTTGGAGTTGAGATTTCATCAAGGCCAATCTCACGCTCAAGGGTGCTTTTGAAATCTCTTGAAACATCCTGTAGC
TCTCTAATAGTGGGCTGAAATGTACGCAGTGTTTTCCCAAGAGTTCGAGCAACCTCTGCAAGGCCTTTAGGACCAAAGACGAGCAA
AGCAACAACTCCAATTACCAAAGCCTCAGGTGCTCCAACGCCAAACAGAGACGCACGAATCACCATACCTTTACTACATCTTCTCT
TTCTCTCTGGGTTTGAAGATTTCGGCGAGATTGAGATGCCCATATGCTTTAGACCAATGTAAGGAGAGTAACGAGAAGAACCCAAA
CATGAAGAGAGATAAGGTTTCGAAGTTTTGTAACAAGGGAGAAGGTGAGACCTATTTGTAATCGTTGGTGAAGAAGATGCTATAAT
CTGAGAGGCCATGGCCATGGGCAGCTTCGAAATTTTTATTATTACAGTTTTTGTCTGTGTTAGCTTCGAAGAATCTTTAAGACATA
ACTCACTCCCTCACCTTCATCAGGACCAATCCATGTCCATTAGCTTGGAGAAAAAAAAGGATAAAATGGAAATCTAAATTATCCTA
TGGGAATATCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864174 HCF106 [Arabidopsis lyrata subsp. lyrata]7906e-082
NP_200057 Bacterial sec-independent translocation protein mttA/Hcf106 [Arabidopsis thaliana]7754e-080
XP_002513673 conserved hypothetical protein [Ricinus communis]5092e-049
ABK94883 unknown [Populus trichocarpa]5074e-049
XP_002321929 predicted protein [Populus trichocarpa]5074e-049

Swiss-Prot top hits (Blast detail)Scoree value
Q31RR1 Sec-independent protein translocase protein tatA/E homolog1577e-010
Q5N2J3 Sec-independent protein translocase protein tatA/E homolog1577e-010
Q8DJ44 Sec-independent protein translocase protein tatA/E homolog1577e-010
Q110N2 Sec-independent protein translocase protein tatA/E homolog1326e-007
A3PB74 Sec-independent protein translocase protein tatA/E homolog1282e-006

TrEMBL top hits (Blast detail)Scoree value
Q9XH75 HCF1067752e-080
B9RIV4 Putative uncharacterized protein5092e-049
A9PET0 Putative uncharacterized protein5073e-049
B9IDB3 Predicted protein5073e-049
B9I469 Predicted protein4965e-048

Arabidopsis top hits (Blast detail)Scoree value
AT5G52440.1 HCF106; proton motive force dependent protein transmembrane transporter7751e-082
AT5G28750.1 thylakoid assembly protein, putative1272e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  60%
 
82  40%

Unigene MembersMember information