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Information for unigene UN20425
| FASTA Sequence |
| Unigene ID: UN20425 | Length: 1088 |
SSR | | GGGCCATTAAAAACATCTCGCCAGATACATAGATAGATAAACTCCGATCTCTCTCTCTCTGCACGTCGACTTCTTGTTTTTTTTTT
TTGTAAAGATGAAAGCTTTCTGCATATTCTTCGTCTCATTGCTTCTCACCGTTAATTCCAGGGGAGAAGCTACCTCTTCTGTTTTC
TTCATTGATGGATCCAACAACCAATATCTTCGTCCACCATCAGCCGAGGAGCTTCACATGTCCCTCTCTGAGGTATCTGCATCAGT
GTCTGCCTTGTTGGAGTTCCATTTGGAAAGGGAAGCAGAGAGGAAATTTGCATTGAACCTTTTGGATCTATATAATAATATCAGGG
GAGTAGTCGACCTTCATGGGGATTTATCTCATGGTATTGAGAGACCTGCTGAACTAACGGTTGGACGCTTTGGCGGTATTAATGCT
TTAGCACAGGAGTATGGGCAAGGTATGGCTAAGCAAGGGATGGATGTATTGCTTGCCACACTATCAAAGCTATTTGATTTGTTGGA
GACATCTCACAAAGGCCAAATTGTTGGAGTGATCGTCCTTGATGAGAGAGTAAATCAAGAATCAGTTAATCTGCTGAGCGTTGAGT
CTTCTTCTCGTTCATCTGCAGGTCTATGGCTGAGGTAGAGGGTGTTCCAAGTGCAGCCATTATCGCTCAAGTTATACTCGTTAGGC
TGACGCTTGCATGGTTAACTGGAATTATCCTTCTCATTGCGACTATCCTTGGGGTGTACTTCCTTATGTACATGCCTTTGACCAAG
GACACGCTCCTATACTCAAACGTGAAGCTCGATTAAGACATAAATATACAACTTCACAAAACGTCAAGTGAATCTTCAGATCGATC
GTTTAAATCTTTTTTGTGTGTATCAAGCCGTGTTTTTCAGCTGGCTGCATTAAACCAGTATTATTTTGAATGTTTCAAGAGAAGGT
TGACACTTTTTCGTGGCCAAACCAGTTGATGATGTGTTATCTGTATATTGTTGCAATAAGGTTTCATTCTTGATTTATTATTGTTT
TCTTCTTTATATACATGTGAGTCTAAGTCCTATTAATAATAAAGATAGATTCAGAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002885613 hypothetical protein ARALYDRAFT_898953 [Arabidopsis lyrata subsp. lyrata] | 474 | 3e-045 |
| NP_189058 putative type 1 membrane protein [Arabidopsis thaliana] | 466 | 3e-044 |
| XP_002518115 PMP, putative [Ricinus communis] | 274 | 5e-022 |
| XP_002297811 predicted protein [Populus trichocarpa] | 259 | 3e-020 |
| XP_002304710 predicted protein [Populus trichocarpa] | 252 | 2e-019 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9ZSJ7 AT3g24160/MUJ8_16 | 466 | 2e-044 |
| B9RWJ6 PMP, putative | 274 | 3e-022 |
| B9GME5 Predicted protein | 259 | 2e-020 |
| A9PHL4 Predicted protein | 252 | 1e-019 |
| C6T924 Putative uncharacterized protein | 223 | 3e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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