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Information for unigene UN20435

FASTA Sequence
Unigene ID: UN20435Length: 992 SSR 
GGATCGGAGAGAGAGAGAGAGAGGAAGATGAGGTTTTGCTCAATTTCTCCGCCTGTGTGTGTGTTCTCGTCGATTGCTCTTGCGCC
ACCCAGTTCCAATCTCAGTCATCGGCTTCTCCGAATTTGCGCCACTGCTGACGACGGAGTGGAAGCTCCCGAGGAGGTTCAAACCC
AATCTCCTTCCTCTTCTTCTTCCTCTTCTTCTGCACTCGGTAAAGACTTGAAAAAGGTGGTTAACAAGACAGCAGCAACCTTTGCG
CCTAGGGCCTCCACCGCCAGTAAAAACCCAGCTCTCCCTGGAACTACTCTTTACAAAGTTTTTGAGGTTCAAGGTTATGCATCCAT
GTTCCTTGGAGGTGTTCTCTCTTTCAACCTCCTCTTTCCCTCCACCCAACCTGACTTATGGAGGTTGATGGGTATGTGGTCCATTT
GGATGTTCACTATTCCTTCTCTTCGAGCACGTGACTGCCCTCCTAAAGAGAAAGAAGCTCTTAACTATCTTTTTCTCATCATCCCT
TTACTCAATGTTGCTATTCCCTTCTTCTGGAAATCTTTTCCTCTTGTCTGGTCTGCTGATACCCTTGCCTTCTTTGCCATGTATGC
CTGGAAGCTTGGATGGCTGGAAAGAACCGAGTAGAGCTACTCCTGTTGGGATTAGAGTCTGGAAGATTCTATGTCTTCTCTTCCTT
AGAATGAATGGTTCTCCATCCAGCTTCTTTGTTACCAAGTACAGCATATCTAATATTCGAGGTACCTGGGTTTGAGTGAGGCAAAC
AAATGTGTACATTGCTAAATATTGGCAAGCCCCCCCTTAAGTAATATTCATAGACCTCTGAGATGGTTTGTTTGTTTATTATCTAG
GAAATGGAAATGCCACTTCATATACATTTTTTTATCAAGAGCGCAGCTGGTAAATTTACAGAAAATAAACAAGTGTGCTCTCTTTT
TTTTTTCTGAATGAATAAACAAGTGTGCTCATTGCATTTGCATCTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_566122 resistance to phytophthora 1 protein [Arabidopsis thaliana]7753e-080
XP_002880341 predicted protein [Arabidopsis lyrata subsp. lyrata]7638e-079
NP_001189776 resistance to phytophthora 1 protein [Arabidopsis thaliana]7602e-078
XP_002320387 predicted protein [Populus trichocarpa]6832e-069
XP_002524796 conserved hypothetical protein [Ricinus communis]6562e-066

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9ZU82 Expressed protein7752e-080
B9IA07 Predicted protein6831e-069
B9SFM7 Putative uncharacterized protein6561e-066
B8AYC0 Putative uncharacterized protein6292e-063
Q6AUK1 Os05g0404400 protein6292e-063

Arabidopsis top hits (Blast detail)Scoree value
AT2G48070.1 RPH1 (RESISTANCE TO PHYTOPHTHORA 1)7761e-082
AT2G48070.2 RPH1 (RESISTANCE TO PHYTOPHTHORA 1)7761e-082

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
93  38%
 
123  38%
 
82  25%

Unigene MembersMember information