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Information for unigene UN20436

FASTA Sequence
Unigene ID: UN20436Length: 1067 SSR 
GGGAGATATACTTTGGTTATTTCAGGGTTGTCGTTTCTCTCTCTTGTTCTTGAAGTTTTAAGGGGAGAGAGAGAGAGAGAGAAAAG
ATTGAGAGATGGGAAGGGGTAGGGTTCAGCTGAAGAGGATAGAGAACAAGATCAATAGGCAAGTTACTTTCTCCAAGAGAAGATCT
GGTTTGCTCAAGAAAGCTCATGAGATCTCTGTTCTCTGCGATGCTGAGGTTGCTCTCGTTGTCTTCTCTTCCAAAGGCAAACTCTT
CGAATATTCCACTGACTCTAGCATGGAAAGGATACTTGAACGCTACGATCGCTATTTATATTCAGACAAACAACTTGTTGGCCGAG
ACATTTCGCAGAGTGAAAATTGGGTTCTAGAGCATGCTAAGCTCAAGGCAAGAGTTGAGGTACTTGAGAAGAATAAAAGGAATTTT
ATGGGGGAAGATCTTGATTCCTTGAGCCTAAAGGAGCTTCAAAGCTTGGAGCATCAGCTCGACGCTGCTATCAAGAGCATTAGGTC
AAGAAAGAACCAAGCTATGTTCGAATCCATATCAGCGCTCCAGAAGAAGGATAAGGCATTGCAAGATCATAATAATACGCTTCTCA
AAAAGATTAAGGAGAGGGAGAAGAACACGGGTCAGCACGAAGGACAATTAATCCAATGCTCCAACAATTCTTCAGTTCTTCAGCCC
CAGTACTGCGTAACATCCTCCAGAGATGGTCTTGTGGAGAGAGTTGGGGGAGAGAACGGAGGTGCATCGTCATTGATTGAACCAAA
CTCTCTTCTTCCAGCTTGGATGTTACGTCCTACTACGAATGAGTAAAATTATCTAAGTATGATAACATCATCAATGCTTAATATTT
TCATAATATATATCAGCATTTTTGGTGACCTTACTCTTCATTAATACTGATATATGTAATGACGGAATTACAATGTCAAGAACGTA
CGTACTCTATCACTGGATTCACTGCGTCTTAAGGACAAAGGTTCATGATATCGTTGTGATGATTTCTGATGAATGATGTATTGATA
CTTTTCCTTTTACTGTGGCATAGATGCGTGAAATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAD47852 MADS-box protein FUL-d [Brassica oleracea var. botrytis]11742e-126
CAD47851 MADS-box protein FUL-c [Brassica oleracea var. botrytis]11706e-126
NP_568929 agamous-like MADS-box protein AGL8 [Arabidopsis thaliana]11553e-124
XP_002866402 hypothetical protein ARALYDRAFT_919330 [Arabidopsis lyrata subsp. lyrata]11464e-123
Q41274 RecName: Full=Agamous-like MADS-box protein AGL8 homolog; Short=MADS B11213e-120

Swiss-Prot top hits (Blast detail)Scoree value
Q38876 Agamous-like MADS-box protein AGL811551e-125
Q41274 Agamous-like MADS-box protein AGL8 homolog11211e-121
Q40170 Agamous-like MADS-box protein AGL8 homolog6944e-072
Q42429 Agamous-like MADS-box protein AGL8 homolog6873e-071
O22328 Agamous-like MADS-box protein AGL8 homolog6748e-070

TrEMBL top hits (Blast detail)Scoree value
Q1ZZV2 Ful-like protein11741e-126
Q8GTF6 MADS-box protein FUL-d11741e-126
Q8GTF7 MADS-box protein FUL-c11704e-126
Q8GTF9 MADS-box protein FUL-a (Fragment)11193e-120
Q8GTF8 MADS-box protein FUL-b11159e-120

Arabidopsis top hits (Blast detail)Scoree value
AT5G60910.1 AGL8 (agamous-like 8); transcription factor11551e-126
AT5G60910.2 AGL8 (agamous-like 8); transcription factor8574e-092
AT1G69120.1 AP1 (APETALA1); DNA binding / protein binding / protein heterodimerization/ transcription activator/ transcription factor6496e-068
AT1G26310.1 CAL (CAULIFLOWER); DNA binding / transcription factor6083e-063
AT3G30260.1 AGL79 (AGAMOUS-LIKE 79); DNA binding / transcription factor5044e-051

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  20%
 
81  20%
 
72  40%
 
101  20%

Unigene MembersMember information