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Information for unigene UN20450

FASTA Sequence
Unigene ID: UN20450Length: 1393 SSR 
GGAGAAAATACAGCCACAACCTTCGTCTTCTCTTACAAACTTTCATTGAGGAGATCCAAACTAAAGTTTTTAAGTATGTCAGGAAA
CTCTTTAGGACTGTTAGATAGCTCCGGTGGCGGCGTAGGCGGTTCAGCCGAGGAGGAGAAAGATTGAAGATGGAGGAAACCAACGA
AGTAGGCGGTGGAGGAGGAGGAAGCCGGTGGCCAAGACCGGAGACCTTAGCTCTCTTGAGAATACGTTCGGAGATGGATAAATCCT
TTCGTGACTCTACTCTCAAAGCTCCTTTATGGGAAGAAATCTCCGGGAAAATGCTAGAGCTTGGTTACAAGAGAAGTGCAAAGAAG
TGCAAGGAGAAGTTCGAGAACGTGTACAAGTACCACAAACGTACAAAAGAAGGTCGTACTGGTAAATCTGAAGGCAAAACTTACCG
GTTCTTCGAAGAGTTAGAAGCTTTCGAGTCGCAACCCGCAAAATCTCCTGCAGCGACCACGACCACGACCGCAACCACTTCTTTGA
TACCGTGGATCAGCTCTAATACTCCATCAACCGAAAAGACTTCTTCACCGTTGAAACATCATCATCATCATCATCAGGTTAGTGTG
AAACCCATCGCCACAAATCCTACCTTCCCCACCAAGCAACCGTCTTCTACAACACCTTTCCCTTTTTATAGCAACAACCATACAAC
TACACTTGATACTGGTCATAAACCAACTTCGAATGACTTGGTAAACAATGTTTCGTCGCTGAATCTTTTCTCGAGCTCAACTTCTT
CATCTACTGCATCTGACGAGGAAGATGATCAAGAAAAGAGATCGAGAAAGAAGAGGAAATACTGGAAAGGGTTGTTTACCAAGTTG
ACAAAAGAGTTGATGGAGAAACAAGAGAAGATGCAAAAAAGGTTCTTGGAATCTTTGGAGAATCGAGAGAAAGAGAGAATCTCAAG
AGAAGAAGCTTGGAGGGTCCAAGAGGTAGCGAGGATCAATAGAGAACACGAAACACTAGTCAATGAGAGGTCTAATGCCGCAGCTA
GAGACGCTGCAGTCATATCATTCTTACACAAAATCTCTGGAGGACAACAACAACAACAACCACCACAGCAGCAACCGCAGCAGAAT
CATAAAGTACCTCAAAGGAAACAATATCAAAGTGAACAACATTCAATAACATTTGAGAGTAAAGAGCCAAGGCCAGTTCTATTAGA
GACAACAATGAAGATGGGGAACCATTCATTATCTCCTAGTTTCAAGATGGCCTAAGACCGAGGTCGAAGCCTTGATAAAGATAAGG
AAGAATCTTGAAGCTAACTATCAAGAAACGGTACTAAGGGGCATTATGGGAAGAGATATCTGCAGGATGAGAAGATGGGATACATA
GAAGCGCAAACGATGCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002889107 hypothetical protein ARALYDRAFT_895570 [Arabidopsis lyrata subsp. lyrata]14834e-162
NP_177815 SANT DNA-binding domain-containing protein [Arabidopsis thaliana]14655e-160
CAA05997 GT2 [Arabidopsis thaliana]14602e-159
AAM64675 trihelix DNA-binding protein (GT2) [Arabidopsis thaliana]14583e-159
XP_002307497 predicted protein [Populus trichocarpa]7693e-079

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q39117 At1g7689014654e-160
O48592 GT2 protein14601e-159
Q8LBM5 Trihelix DNA-binding protein (GT2)14582e-159
B9H7S1 Predicted protein7692e-079
B9T2F9 Putative uncharacterized protein7558e-078

Arabidopsis top hits (Blast detail)Scoree value
AT1G76890.2 GT2; transcription factor14652e-162
AT1G33240.1 AT-GTL1 (GT2-LIKE 1); DNA binding / transcription factor6336e-066
AT1G76880.1 trihelix DNA-binding protein, putative3998e-039
AT5G03680.1 PTL (PETAL LOSS); transcription factor3092e-028
AT3G10000.1 EDA31 (embryo sac development arrest 31); transcription factor2975e-027

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  33%
 
101  33%
 
61  33%

Unigene MembersMember information