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Information for unigene UN20472

FASTA Sequence
Unigene ID: UN20472Length: 1532 SSR 
GGAAAACGAGGCCGAGAAGCCGAGCAATGCGTTGCTAACCAGAGCTTGGTCACCAGGGTGGAGCAACGCTGATAAGATACTAAACG
AGTTCATCGAGAAGCAGCTCATAGACTACGCAAAGAACAGCAAGAAAGTCGTTGGGAACTCGACGTCGCTGCTCTCTCCTTATCTC
CATTTCGGGGAGATAAGCGTCAGGCGCGTGTTCCAATGCGCTAGGATGAAACAGATCATATGGGTGAGAGACAAGAAGGGTGAAGG
AGAAGAGAGTGCTGATCTTTTCCTCAGAGGGATCGGTCTGAGAGACTATTCTCGTTATATATGTTTCAACTTCCCTTTTACTCACG
AGCAGTCTTTGCTGAGTCATCTCCGTTTCTTCCCTTGGGATGCTGATGTCGAGAAGTTCAAGGCGTGGAGGCAAGGCAGGACTGGT
TATCCGTTGGTGGATGCTGGGATGAGAGAGCTTTGGGCTACTGGATGGATGCATAACAGGATTAGAGTGATTGTTTCGAGCTTTGC
TGTGAAGTTTCTTCTTCTTCCGTGGAAATGGGGGATGAAGTATTTTTGGGATACTCTTTTGGATGCTGATTTGGAGTGTGACATCA
TTGGATGGCAGTATATCTCCGGGAGCTTGCCTGATGGCCACGAGCTTGATCGCTTGGACAATCCTGCAATACAAGGCGCAAAGTAT
GACCCGGAAGAGAGTACATAAGCAATGGCTACCCGAGCTGGCGAGGTTGCCAACTGAATGGATCCATCATCCATGGGACGCTCCTT
TAACGTACTCAAAGCTTCCGGTGTGGAACTCGGAACTAACTACGCCAAACCCATCGTAGATATCGACACAGCTCGTGAGCTGCTAA
CCAAAGCCATATCAAGAACTCGTGAAGCACAGATCATGATCGGAGCAGCGCCTGATGAGATTGTAGCTGATAGCTTCGAGGCCCTA
GAGGCTGCTAATACCGTTAAAGAACATGGTCTTTGCCCGTCGTCTAATGACCAGCAAGTACCGTCGGATATTCGTTACAATGGATC
GAAGAGAATGAAACCCGTTGAAGAAGAAGAAGAAGAAGAGAGAGAGATGAAGAAACTTAGAGGGTTCAATGAAGTTATTAGAGAAG
AAGAAGAAAGGGGTTTGTTTTCTACTGCTGAGTCTTCTGCTTCTTCGAGTGTTAGGAGTGTGTTCATGGTTTTTCATTCTTGCTCG
CTCGTATCAGAAGGGAAGAATCTGGAAGGTATTCAAGATTCTTCTGATCAGATTGCTACAAGTTTGGGGAAAAATGGTTAGAAATG
ATCAAAGATAAAGCTTTAATGTTATTCCCGCTTTTGCTATTACTATAAAACCTAACATGCAGAAGTATGTATGTGTGTGTGTGTCT
CTTGACTCCTTGCTCCTTGTGATGATCCTCCCAAGAACAAGATGGAATAAACTTATATCATATCTTCTGATAGATGATGGATAAAA
TAATAAAAGATATTTCTATAAATGATTTTGTAGTTGTTTGCCTGTATACAATAAGAAACATGATTTGTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ADM47404 cryptochrome 2 [Brassica juncea]19908e-221
CAI63876 cryptochrome 2 [Brassica napus]19461e-215
BAC67176 cryptochrome 2 [Armoracia rusticana]17731e-195
BAC67178 cryptochrome 2 [Armoracia rusticana]17622e-194
BAC67179 cryptochrome 2 [Armoracia rusticana]17622e-194

Swiss-Prot top hits (Blast detail)Scoree value
Q96524 Cryptochrome-216355e-181
P40115 Cryptochrome-114152e-155
Q43125 Cryptochrome-19411e-100
Q55081 Deoxyribodipyrimidine photo-lyase3802e-035
Q9KNA8 Deoxyribodipyrimidine photo-lyase3452e-031

TrEMBL top hits (Blast detail)Scoree value
A4F358 Cryptochrome 219467e-216
Q84L84 Cryptochrome 217738e-196
Q84L82 Cryptochrome 217622e-194
Q84UJ4 Cryptochrome 217622e-194
B0LQ55 At1g04400-like protein (Fragment)16232e-178

Arabidopsis top hits (Blast detail)Scoree value
AT1G04400.2 CRY2 (CRYPTOCHROME 2); blue light photoreceptor/ protein homodimerization18066e-202
AT1G04400.1 CRY2 (CRYPTOCHROME 2); blue light photoreceptor/ protein homodimerization18066e-202
AT4G08920.1 CRY1 (CRYPTOCHROME 1); ATP binding / blue light photoreceptor/ protein homodimerization/ protein kinase9411e-101
AT5G24850.1 CRY3 (cryptochrome 3); DNA binding / DNA photolyase/ FMN binding2189e-018
AT3G15620.1 UVR3 (UV REPAIR DEFECTIVE 3); DNA (6-4) photolyase2124e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  33%
 
92  67%

Unigene MembersMember information