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Information for unigene UN20486

FASTA Sequence
Unigene ID: UN20486Length: 637  SNP
GGGGGGGACACTTGGGAGTTGGAGCCAGAAACGAAAACGAGGAAGCAGAAGAGTTCAACACCAGAAAGCAAAGCTCACGATGGCAA
GGATTAAGGTTCACGAGCTTAGAGAGAGATCGAAGACGGATCTTCAGAGCCAGCTTCAGGAGTTCAAGGCTGAGCTCGCCCTCCTC
CGTGTCGCTAAAGTCACCGGAGGTGCCCCCAACAAGCTTTCCAAAATCAAGGTCGTGAGGAAATCAATTGCTCAGGTATTGACAGT
GATCTCACAGAAGCAGAAATTAGCACTAAGAGAAGCATACAAGAACAAGAAGTTCTTGCCTCTTGATCTTCGTCCCAAGAAGACAC
GTGCTATCCGTAGACGTCTTACCAAGCATCAGTCTTCCTTAAAGACAGAGCGTGAGAAGAAGAAAGAGATGTATTTCCCTCTGAGG
AAGTATGCTATCAAAGTCTAGTTTCAATGTTTCATTCTCCAGGATTCCTTACTAGGAATGATTCAGCTTTTTGATTATTCACTTAT
TTTGTCCACCTTTGTTTTTTTACTCAAGTTTTGTCATGTAACAGTCAAATCTATCTCTCACTCCTCGAAAACATTGTTTCGTAATA
ATTGAAATTGAACCAGTTCTCGGCTTTGTGTTAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002870982 60S ribosomal protein L35 [Arabidopsis lyrata subsp. lyrata]5734e-057
NP_195881 60S ribosomal protein L35-4 [Arabidopsis thaliana]5662e-056
XP_002881653 Os04g0376000 [Arabidopsis lyrata subsp. lyrata]5635e-056
NP_181471 60S ribosomal protein L35-2 [Arabidopsis thaliana]5592e-055
NP_187561 60S ribosomal protein L35-1 [Arabidopsis thaliana]5546e-055

Swiss-Prot top hits (Blast detail)Scoree value
Q9LZ41 60S ribosomal protein L35-45661e-057
O80626 60S ribosomal protein L35-25598e-057
Q9SF53 60S ribosomal protein L35-15543e-056
Q9M5L0 60S ribosomal protein L355436e-055
Q9M3D2 60S ribosomal protein L35-35373e-054

TrEMBL top hits (Blast detail)Scoree value
Q0WWT8 Ribosomal protein L35 like protein5662e-056
Q53U38 Similar to 60S ribosomal protein L355438e-054
A9P9X6 Predicted protein5421e-053
A9PCH3 Predicted protein5421e-053
A9PK09 Putative uncharacterized protein5421e-053

Arabidopsis top hits (Blast detail)Scoree value
AT5G02610.1 60S ribosomal protein L35 (RPL35D)5679e-059
AT2G39390.1 60S ribosomal protein L35 (RPL35B)5606e-058
AT3G09500.1 60S ribosomal protein L35 (RPL35A)5552e-057
AT3G55170.1 60S ribosomal protein L35 (RPL35C)5382e-055
AT3G55170.2 60S ribosomal protein L35 (RPL35C)5382e-055

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
74  33%
 
121  8%
 
115  42%
 
192  17%

Unigene MembersMember information