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Information for unigene UN20509

FASTA Sequence
Unigene ID: UN20509Length: 1370 SSR 
CATGCATGGATACTGCCAGTTTGTGTTTTTTCATCTTTAATATAAAATAATAACAATCAAACGTCATTAGAAAATCATACACATAT
AAAACGTAATTTAAAATTTTGATAAAAGGACTACTTCATAAAATATTGTATTTTCTTAAAGTAAGCATAATCTTCCACGTGTAGGT
TTAGGGGACTTTTATACTCTCACGTGGAAAGTCGATCATACGGAATTCAGCAAGCTAGCGCAATAGAGCAAATATAAAGTTGAGAA
GTAAACATAGATGTAAGCGAAAGTAGCATTTCAAAGTTGGCCCACAAGTCACATTCTAACCCTCACTTCACCAAGCAAGAAATTAG
ATACTACATGTCACTAGGTTCCAACGCAGCCTTTATTTTCTTCTCTCTGCTAATTGAGGAACACCAAAGTTAAACGTGAGACTGGC
TCCTGAAGGACCCGAGCGCCTTTACCGCACCAGCCCTCAACACAAACTGATGGTAGAAAGCCGCAAGGGCTGCACCCGCAAACGGA
CCAACCCAAAATATCCAATGATGGTCCCAAGCTTGGTCCTTGTTGTAGATGATTGCAGCTCCAAGACTTCTTGCAGGGTTAATGCC
AGTGCCCGTGATTGGGATTGTAGCCAAGTGAACAATGAATACCGCAAATCCAATTGGTAATGGAGCCAATACAGGGACGTGAGAGT
CACGCGCACTCCTCTTGGGGTCAGTGGCGGAGAAGACGGTGTAGACTAGGACGAAAGTACCGATGATCTCGGCGGCAACACCGGTG
CCGATGCTATAACCGTGTGAGAGACCGTTTGCGCCACCACCGTAGCGGGTGTAGTAAGAAGACTGGAAGGACTTAACCAAAGCCAC
ACCGCAAATTGCACCAAGGCACTGAGCCACCATGTACATAACCGCTCTCACCAACGTCACTTTCCGAGCCAAGAACAGCCCAAACG
TCACGGCCGGGTTTATATGTCCACCAGAGATTCCGGCAGTGCAGTAGACAAGGATGAAGATCATGCCACCGAAGGCCCAAGCGATG
CCGAGTACACCAACACCTGCACACTGGTCAGGGTTTAGGGTTGGATCGGTCTGGTTCTTGTAACCAATGACAGTCATAACGGTGAC
ATAGAGGAAGAGGAGAGTGGCTATGAACTCAGCGATGAGAGCTCTGTAAAAAGACCACTTCCCAAGCTCAGTAGCATCGAACAGAG
GCTCAGGTGGTGGATCTTGATAATCTTTTCCGGAGAAAGATCCCTTCTCGCCAGCCACATCTTTCGTCATTGATAGTGTTCTTCTT
CACCAAAACTAAGAGTATGTCTCTGTAATCTTTTAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACTGATGTGGTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_191042 putative aquaporin PIP2-5 [Arabidopsis thaliana]14306e-156
BAB40143 plasma membrane intrinsic protein 2-2 [Pyrus communis]12854e-139
ABU94631 putative aquaporin PIP2;3 [Phaseolus vulgaris]12658e-137
AAC17529 aquaporin 2 [Samanea saman]12612e-136
ABB88840 aquaporin [Stevia rebaudiana]12513e-135

Swiss-Prot top hits (Blast detail)Scoree value
Q9SV31 Probable aquaporin PIP2-514303e-157
P43287 Aquaporin PIP2-212072e-131
Q8H5N9 Probable aquaporin PIP2-112044e-131
Q84RL7 Aquaporin PIP2-112035e-131
P43286 Aquaporin PIP2-112027e-131

TrEMBL top hits (Blast detail)Scoree value
Q9AVB3 Plasma membrane intrinsic protein 2-212853e-139
A8SJR3 Putative aquaporin PIP2;312656e-137
O65357 Aquaporin 212612e-136
Q2I6J7 Aquaporin (Fragment)12512e-135
Q8W1A6 Aquaporin-like protein12352e-133

Arabidopsis top hits (Blast detail)Scoree value
AT3G54820.1 PIP2;5 (PLASMA MEMBRANE INTRINSIC PROTEIN 2;5); water channel14312e-158
AT2G37170.1 PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2); water channel12081e-132
AT3G53420.1 PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A); water channel12035e-132
AT3G53420.2 PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A); water channel12035e-132
AT2G39010.1 PIP2E (PLASMA MEMBRANE INTRINSIC PROTEIN 2E); water channel11929e-131

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  25%
 
64  50%
 
82  25%

Unigene MembersMember information