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Information for unigene UN20541
| FASTA Sequence |
| Unigene ID: UN20541 | Length: 615 |
SSR | | GGATTGCATCTCTCTCCTCTCCTCATAGAAACAAGCGAAGCCAAAGGGATAAAAAGAAAAAAAAAACAATGGAATCCAGCAGAGGA
GGAGGAGGAGGTGGAATCCAGCAGTTGCTTGCTGCTGAACAAGAAGCTCAACACATTGTCAATGCTGCTAGGACCGCAAAGATGGC
AAGGCTGAAGCAAGCCAAGGAAGAGGCTGAGAAAGAGATTGCCGAATACAAGGCTAAGACAGAGCAAGACTTCCAGAGGAAACTTG
AAGAGACAAGTGGAGACTCGGGTGCGAATGTGAAGAGGCTGGAGCAAGAGACTGATGCCAAAATCGAACAGCTCAAGAACGAAGCT
TCCAGGATTTCCAATGATGTTGTGGATATGCTCCTCAAACATGTCACCACTGTCAAGAACTGAGAGTCATTTATCACTTTGAGTTT
CTGCTCTCTGTTTCTGGATGGATTGAAGAGACTTGATAAATCTCATATTGTATTTGTTGCTATGAGTTATTTATTATCTGCTTTCT
TTTTTTTTTTTGTTGCTATTAATATCTCTTGTTGTTGTATTCATAATAATTGTCTTTTGGGTTGTAATGAACTCGTTTATTTATAT
AAGAAAACTTTAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_186788 V-type proton ATPase subunit G1 [Arabidopsis thaliana] | 474 | 1e-045 |
| NP_194102 V-type proton ATPase subunit G2 [Arabidopsis thaliana] | 424 | 6e-040 |
| CAI48069 ATPase [Capsicum chinense] | 423 | 8e-040 |
| XP_002281146 PREDICTED: hypothetical protein [Vitis vinifera] | 421 | 1e-039 |
| CAA06759 vag2 [Arabidopsis thaliana] | 420 | 2e-039 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O82628 V-type proton ATPase subunit G1 | 474 | 5e-047 |
| O82629 V-type proton ATPase subunit G2 | 424 | 3e-041 |
| O82702 V-type proton ATPase subunit G 1 | 415 | 4e-040 |
| Q9SP55 V-type proton ATPase subunit G | 391 | 2e-037 |
| O82703 V-type proton ATPase subunit G 2 | 384 | 1e-036 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WT72 Vacuolar-type H+-ATPase (V-ATPase) subunit G2 | 424 | 5e-040 |
| Q5GMM8 ATPase | 423 | 6e-040 |
| B2WS67 Vacuolar ATP synthase subunit G2 | 419 | 2e-039 |
| B2WS83 Vacuolar ATP synthase subunit G2 | 410 | 2e-038 |
| Q2V994 ATPase-like | 407 | 4e-038 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G01390.1 VMA10 (VACUOLAR MEMBRANE ATPASE 10); hydrogen ion transporting ATP synthase, rotational mechanism | 475 | 4e-048 |
| AT3G01390.2 VMA10 (VACUOLAR MEMBRANE ATPASE 10); hydrogen ion transporting ATP synthase, rotational mechanism | 475 | 4e-048 |
| AT4G23710.1 VAG2; hydrolase, acting on acid anhydrides, catalyzing transmembrane movement of substances | 425 | 2e-042 |
| AT4G25950.1 VATG3 (vacuolar ATP synthase G3); hydrolase, acting on acid anhydrides, catalyzing transmembrane movement of substances | 285 | 4e-026 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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