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Information for unigene UN20558

FASTA Sequence
Unigene ID: UN20558Length: 1081 SSR 
GGCCATCGAAGAGAAACAAAAGAAAAAAAAAAGAAGAAAAGGAGAAGAAGGCGAAAAGAGCAAGCAAACCCTAATCTCTCTCTCTC
AAAAAAAAAAAACTTACGTTTCAGGTATGGGAGATCTCATCGCTATCACAGATCATAATCTTTTCGATGAAGAAACAAAGCGAAAC
AATCAGCTAAGCCGATTGTCGGTGAATTTAATAAAAGCAGAATCCACTCCTATGGGCCAAAATCGTTTAATTTGCACAGGCTTCCA
GTTCCTGTACGTGGAGATATTGTAGGATTGGTCGGACCTCGCAGTATTGGAAAAACTACTGCTCTCAAAATCTTGGCCGGGGAACT
CACACCCAATCTCGGCCGCTTCAATGATCCTCCTCTTGATTGGCTAACAATTCGGACTCACTTGCATGATAAACATCTTAGAAGAT
TCTTGGCCCAGGTTGTAAACCATAAACTCAAGGTCGTGTTTAAGCCCCAACAAGTCCCACAAGACTATATGGGGCTTGCTGTCTGG
GAGATTCTTCGTAAAGTCGACGACAGAAAAGATTTAAGGGCTCTTATACTTTGTTTTCTCGACTTGAAGACCCCGTCTGTGAAGTT
CCACCGTTTAGATATAAGAGCGCAGCACAGGTTACTCTCGCTGCAGCTCTCTTGCAGACGCTGATGTGTACATATTTGACGACATA
TCTAGTTTCCTTGATATGCGTCAGAGGTCATGGTTGCCCAACTCATACGCTCTCTCAAAACCGCTAAAAGCTACGTGATTGTTGTG
GACAATGACCTTAGTGTCATCGACTATGTTTCGGATTACATGTACATTATGTATGGGGAACCTGAAGCATATGGTGTCTTTAGTGA
GCAGTACTTTGATGTCGAAACAGGAATTGAATATTACTTGCGTGGGTTTGATCCCATAGAAGACAACCTTATCAGGGGTGACCCCC
TCATCTTCGAGAGGGATTTTTTCATTTCTGCTCCCAATGAAAAGCACCTCGAGCCCGACCCCGAACCTTTGATCGGTAGAAGATAC
TCTTATCCTCACATGACTACAAATCATCTGAAACTCAAGATGAAAGTGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_147723 putative ATPase RIL [Aeropyrum pernix K1]3391e-029
XP_002271392 PREDICTED: hypothetical protein [Vitis vinifera]2852e-023
CBI29193 unnamed protein product [Vitis vinifera]2852e-023
XP_002328845 predicted protein [Populus trichocarpa]2809e-023
XP_002303221 predicted protein [Populus trichocarpa]2782e-022

Swiss-Prot top hits (Blast detail)Scoree value
Q9LID6 ABC transporter E family member 12706e-023
Q8LPJ4 ABC transporter E family member 22706e-023
P61221 ATP-binding cassette sub-family E member 12482e-020
P61222 ATP-binding cassette sub-family E member 12482e-020
O60102 Uncharacterized ABC transporter ATP-binding protein C14F5.062303e-018

TrEMBL top hits (Blast detail)Scoree value
Q9YCZ3 ABCE1 homolog3399e-030
B9N0Q3 Predicted protein2806e-023
B9GVN7 Predicted protein (Fragment)2781e-022
B8LR96 Putative uncharacterized protein2752e-022
A3CC60 Putative uncharacterized protein2743e-022

Arabidopsis top hits (Blast detail)Scoree value
AT3G13640.1 ATRLI1; transporter2705e-024
AT4G19210.1 ATRLI2; transporter2705e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  67%
 
111  33%

Unigene MembersMember information